Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5612

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5611: 13979 - HMMPfam-Protein of unknown function (DUF2433)-PF10360, at 507663 to 510497 13979 mRNA_5612: 13980 - K14213 PEPD Xaa-Pro dipeptidase, at 510647 to 512391 13980 mRNA_5613: 13981 - K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5, at 512639 to 514652 13981

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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510,099 + 13979 mRNA_5611 0.86 -1.9
510,378 - -1.0
510,716 - 1.4
511,012 - 13980 mRNA_5612 0.21 0.2
511,029 - 13980 mRNA_5612 0.22 1.9
511,464 - 13980 mRNA_5612 0.47 -0.8
511,636 - 13980 mRNA_5612 0.57 -1.2
512,057 - 13980 mRNA_5612 0.81 0.4
512,192 + 13980 mRNA_5612 0.89 0.8
512,215 - 13980 mRNA_5612 0.90 1.3
512,345 - 0.8
512,345 - 0.4
512,352 + -1.0
512,372 - 1.4
512,375 + 1.4
512,519 - -0.6
512,533 - -0.6