Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5606

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5605: 13973 - Hypothetical Protein, at 489927 to 490531 13973 mRNA_5606: 13974 - HMMPfam-Glycosyl hydrolase family 61-PF03443, at 490691 to 492139 13974 mRNA_5607: 13975 - HMMPfam-rRNA processing-PF08524, at 492643 to 493643 13975

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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489,814 + 0.2
489,951 + -1.2
490,908 + 13974 mRNA_5606 0.15 0.5
491,642 - 13974 mRNA_5606 0.66 -2.2
491,714 + 13974 mRNA_5606 0.71 0.2
491,893 + 13974 mRNA_5606 0.83 -0.3
492,008 + -1.6
492,129 - 0.0
492,129 - -1.3
492,261 - 1.1
492,279 + 0.4
492,298 - -0.6
492,303 - -0.6
492,412 - -2.0
492,434 - -0.7
492,459 + -0.3
492,586 - -0.5
492,608 + 1.0
492,727 - 0.4
492,727 - 0.0
492,736 + -0.8
492,736 + 0.4
492,876 + 13975 mRNA_5607 0.23 2.2