Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5599

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5598: 13966 - KOG0118 FOG RRM domain, at 474328 to 475458 13966 mRNA_5599: 13967 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 475591 to 478385 13967 mRNA_5600: 13968 - BLAST polysaccharide lyase family 14 protein [Sistotremastr..., at 479032 to 480783 13968

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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475,750 + 0.4
475,751 + -0.4
475,752 + -1.2
475,761 + 0.4
475,766 - 0.1
475,771 + -0.8
475,777 + 1.3
475,921 + 13967 mRNA_5599 0.12 0.8
475,922 - 13967 mRNA_5599 0.12 -0.1
475,932 - 13967 mRNA_5599 0.12 -0.4
475,933 - 13967 mRNA_5599 0.12 1.2
475,947 + 13967 mRNA_5599 0.13 0.4
475,950 + 13967 mRNA_5599 0.13 0.3
475,954 + 13967 mRNA_5599 0.13 -0.7
475,984 - 13967 mRNA_5599 0.14 1.3
476,074 - 13967 mRNA_5599 0.17 -0.8
476,078 - 13967 mRNA_5599 0.17 -0.2
476,088 - 13967 mRNA_5599 0.18 -1.4
476,093 - 13967 mRNA_5599 0.18 -0.3
476,100 + 13967 mRNA_5599 0.18 -2.2
476,100 + 13967 mRNA_5599 0.18 0.4
476,104 - 13967 mRNA_5599 0.18 1.9
476,105 - 13967 mRNA_5599 0.18 0.3
476,105 + 13967 mRNA_5599 0.18 0.2
476,122 + 13967 mRNA_5599 0.19 -0.3
476,141 - 13967 mRNA_5599 0.20 -0.5
476,142 - 13967 mRNA_5599 0.20 1.0
476,152 - 13967 mRNA_5599 0.20 -1.5
476,177 + 13967 mRNA_5599 0.21 -1.0
476,199 + 13967 mRNA_5599 0.22 -0.3
476,290 + 13967 mRNA_5599 0.25 0.2
476,296 - 13967 mRNA_5599 0.25 -1.0
476,326 + 13967 mRNA_5599 0.26 -0.5
476,326 + 13967 mRNA_5599 0.26 0.1
476,339 - 13967 mRNA_5599 0.27 -0.2
476,352 - 13967 mRNA_5599 0.27 0.0
476,363 - 13967 mRNA_5599 0.28 -0.8
476,364 - 13967 mRNA_5599 0.28 -0.6
476,364 - 13967 mRNA_5599 0.28 -0.2
476,365 + 13967 mRNA_5599 0.28 1.0
476,368 - 13967 mRNA_5599 0.28 0.1
476,377 + 13967 mRNA_5599 0.28 2.2
476,378 + 13967 mRNA_5599 0.28 -0.0
476,379 - 13967 mRNA_5599 0.28 0.2
476,382 - 13967 mRNA_5599 0.28 0.3
476,393 - 13967 mRNA_5599 0.29 0.9
476,401 - 13967 mRNA_5599 0.29 1.7
476,410 + 13967 mRNA_5599 0.29 1.0
476,410 - 13967 mRNA_5599 0.29 0.4
476,411 + 13967 mRNA_5599 0.29 0.4
476,429 + 13967 mRNA_5599 0.30 1.6
476,437 - 13967 mRNA_5599 0.30 0.1
476,442 - 13967 mRNA_5599 0.30 -2.0
476,444 - 13967 mRNA_5599 0.31 0.6
476,446 - 13967 mRNA_5599 0.31 0.2
476,448 + 13967 mRNA_5599 0.31 0.2
476,449 + 13967 mRNA_5599 0.31 0.1
476,453 + 13967 mRNA_5599 0.31 0.5
476,463 + 13967 mRNA_5599 0.31 -0.0
476,465 + 13967 mRNA_5599 0.31 0.8
476,468 + 13967 mRNA_5599 0.31 0.9
476,469 + 13967 mRNA_5599 0.31 1.0
476,477 + 13967 mRNA_5599 0.32 1.0
476,586 + 13967 mRNA_5599 0.36 -0.8
476,601 + 13967 mRNA_5599 0.36 0.5
476,602 + 13967 mRNA_5599 0.36 0.1
476,602 + 13967 mRNA_5599 0.36 -0.1
476,613 + 13967 mRNA_5599 0.37 0.3
476,739 + 13967 mRNA_5599 0.41 0.8
476,892 + 13967 mRNA_5599 0.47 2.4
476,916 + 13967 mRNA_5599 0.47 -0.1
477,292 + 13967 mRNA_5599 0.61 0.8
477,302 - 13967 mRNA_5599 0.61 -0.3
477,328 + 13967 mRNA_5599 0.62 1.9
477,422 + 13967 mRNA_5599 0.66 0.4
477,534 - 13967 mRNA_5599 0.70 0.2
477,797 + 13967 mRNA_5599 0.79 -0.5
477,838 - 13967 mRNA_5599 0.80 0.7
477,916 + 13967 mRNA_5599 0.83 0.5
478,137 - 0.3
478,453 - 1.2
478,491 - 1.4
478,718 + -1.6
478,867 - -1.9
478,874 - -0.3