Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5591

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5591: 13959 - K11182 AOC1, ABP1 diamine oxidase, at 458129 to 461343 13959 mRNA_5592: 13960 - HMMPfam-Alcohol acetyltransferase-PF07247,SUPERFAMILY--SSF52777, at 461599 to 463064 13960

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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457,260 + -0.4
457,327 + 1.1
457,332 + -0.6
457,442 - -0.7
457,454 - 0.5
457,465 + -0.3
457,468 + 0.3
457,596 + 0.3
457,642 + 0.3
457,706 + 1.8
457,757 - 1.4
457,909 - 0.1
457,998 - 1.2
458,023 + -0.9
458,024 - 0.3
458,051 - -0.0
458,055 - 0.4
458,058 + 1.6
459,071 - 13959 mRNA_5591 0.29 0.4
459,203 + 13959 mRNA_5591 0.33 -0.1
459,203 + 13959 mRNA_5591 0.33 -0.0
459,226 + 13959 mRNA_5591 0.34 -3.4
459,335 - 13959 mRNA_5591 0.38 0.4
459,384 + 13959 mRNA_5591 0.39 -1.4
459,390 - 13959 mRNA_5591 0.39 0.0
459,777 - 13959 mRNA_5591 0.51 0.8
459,795 + 13959 mRNA_5591 0.52 -0.2
460,080 - 13959 mRNA_5591 0.61 -0.7
460,085 + 13959 mRNA_5591 0.61 0.6
460,492 - 13959 mRNA_5591 0.73 -0.1
460,521 - 13959 mRNA_5591 0.74 0.9
460,954 - 13959 mRNA_5591 0.88 0.9
461,214 - 0.3
461,232 - 0.7
461,497 + -2.6
461,497 + -0.7
461,562 - 0.6
461,686 - -0.6
461,697 - -0.5
461,953 - 13960 mRNA_5592 0.24 -1.0
462,286 - 13960 mRNA_5592 0.47 1.1
462,330 + 13960 mRNA_5592 0.50 -3.0