Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5582

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5581: 13949 - KOG1198 Zinc-binding oxidoreductase, at 426490 to 430753 13949 mRNA_5582: 13950 - KOG0254 Predicted transporter (major facilitator superfamily), at 431120 to 432974 13950 mRNA_5583: 13951 - BLAST putative ATP-dependent RNA helicase DHR1 [Wallemi..., at 433423 to 434660 13951

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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430,334 - 0.1
430,820 + 0.2
430,983 - 1.3
431,582 - 13950 mRNA_5582 0.25 0.5
432,015 - 13950 mRNA_5582 0.48 0.5
432,022 + 13950 mRNA_5582 0.49 0.1
432,035 + 13950 mRNA_5582 0.49 -1.3
432,651 + 13950 mRNA_5582 0.83 0.0
433,052 - 0.3
433,061 - -0.9
433,190 + 2.7
433,204 - -0.4
433,216 + 1.9
433,217 + 0.3
433,219 + 0.1
433,225 + -0.2
433,226 - 0.1
433,349 - -1.3
433,362 + 0.5
433,367 + 0.2
433,369 - -0.1