Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5528

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5527: 13895 - K11883 NOB1 RNA-binding protein NOB1, at 303697 to 305493 13895 mRNA_5528: 13896 - HMMPfam-Protein of unknown function (DUF2416)-PF10315, at 305773 to 306425 13896 mRNA_5529: 13897 - K18045 SIW14, OCA3 tyrosine-protein phosphatase SIW14, at 306670 to 307631 13897

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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305,508 - 0.0
305,542 - -0.2
305,722 - -0.2
305,837 - 0.6
306,006 - 13896 mRNA_5528 0.36 -2.0
306,125 - 13896 mRNA_5528 0.54 0.5
306,134 - 13896 mRNA_5528 0.55 -0.6
306,170 + 13896 mRNA_5528 0.61 -0.0
306,292 - 13896 mRNA_5528 0.79 -0.0
306,315 + 13896 mRNA_5528 0.83 -0.2
306,341 - 13896 mRNA_5528 0.87 -2.0
306,432 - -0.4
306,440 + -2.8
306,446 - -1.8
306,452 - 0.7
306,761 + -0.5
306,863 + 13897 mRNA_5529 0.20 0.4
307,175 + 13897 mRNA_5529 0.52 0.5
307,183 + 13897 mRNA_5529 0.53 0.3
307,354 - 13897 mRNA_5529 0.71 0.3