Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5486

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5485: 13853 - K02896 RP-L24e, RPL24 large subunit ribosomal protein L24e, at 209798 to 210668 13853 mRNA_5486: 13854 - K15695 RNF103, KF1 E3 ubiquitin-protein ligase RNF103, at 211057 to 213286 13854 mRNA_5487: 13855 - HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 213824 to 214622 13855

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
210,672 - -0.7
210,678 + -0.7
210,686 - 1.6
210,726 + 0.1
211,397 + 13854 mRNA_5486 0.15 0.4
211,996 - 13854 mRNA_5486 0.42 1.9
211,999 - 13854 mRNA_5486 0.42 -0.4
212,009 + 13854 mRNA_5486 0.43 0.4
212,251 - 13854 mRNA_5486 0.54 -0.4
212,622 + 13854 mRNA_5486 0.70 0.2
212,626 + 13854 mRNA_5486 0.70 -1.8
212,710 - 13854 mRNA_5486 0.74 0.9
212,781 - 13854 mRNA_5486 0.77 -0.0
212,811 - 13854 mRNA_5486 0.79 0.3
212,811 - 13854 mRNA_5486 0.79 1.5
213,057 + 13854 mRNA_5486 0.90 -0.6
213,510 - 0.6
213,641 + 3.7
213,658 - -0.0
214,062 - 13855 mRNA_5487 0.30 0.7
214,102 + 13855 mRNA_5487 0.35 -0.9
214,135 + 13855 mRNA_5487 0.39 -0.1
214,201 + 13855 mRNA_5487 0.47 -0.8