Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5433

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5432: 13800 - Hypothetical Protein, at 86010 to 86874 13800 mRNA_5433: 13801 - BLAST UPF0658 Golgi apparatus membrane protein [Termitomyce..., at 87517 to 89164 13801 mRNA_5434: 13802 - KOG2852 Possible oxidoreductase, at 89359 to 90914 13802

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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86,546 + 13800 mRNA_5432 0.62 -0.3
86,668 - 13800 mRNA_5432 0.76 2.6
86,675 - 13800 mRNA_5432 0.77 1.1
86,675 + 13800 mRNA_5432 0.77 -0.6
86,776 + 13800 mRNA_5432 0.89 -0.9
86,832 + -0.4
87,750 + 13801 mRNA_5433 0.14 -0.5
87,833 - 13801 mRNA_5433 0.19 -0.6
87,861 + 13801 mRNA_5433 0.21 -1.0
87,871 + 13801 mRNA_5433 0.21 2.2
87,878 + 13801 mRNA_5433 0.22 -0.7
87,880 - 13801 mRNA_5433 0.22 0.6
87,882 + 13801 mRNA_5433 0.22 0.4
87,895 - 13801 mRNA_5433 0.23 -0.1
88,006 - 13801 mRNA_5433 0.30 -1.5
88,033 - 13801 mRNA_5433 0.31 -0.5
88,051 + 13801 mRNA_5433 0.32 0.2
88,146 + 13801 mRNA_5433 0.38 1.7
88,158 - 13801 mRNA_5433 0.39 -1.5
88,169 - 13801 mRNA_5433 0.40 -0.3
88,170 + 13801 mRNA_5433 0.40 -1.3
88,170 - 13801 mRNA_5433 0.40 1.2
88,321 - 13801 mRNA_5433 0.49 -2.8
88,454 + 13801 mRNA_5433 0.57 0.4
88,462 + 13801 mRNA_5433 0.57 0.3
88,622 + 13801 mRNA_5433 0.67 1.6
88,760 - 13801 mRNA_5433 0.75 0.6
88,782 - 13801 mRNA_5433 0.77 0.2
88,851 + 13801 mRNA_5433 0.81 -0.2
88,884 - 13801 mRNA_5433 0.83 -0.5
88,963 - 13801 mRNA_5433 0.88 -1.0
89,190 + -0.1
89,469 + 0.3
89,620 + 13802 mRNA_5434 0.17 1.1
89,761 + 13802 mRNA_5434 0.26 2.6
89,768 + 13802 mRNA_5434 0.26 0.3
89,906 - 13802 mRNA_5434 0.35 -0.3