Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5394

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5394: 13762 - SUPERFAMILY--SSF54897, at 121 to 1074 13762 mRNA_5395: 13763 - KOG4551 GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis, at 1148 to 1997 13763

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1 + -0.2
1 + 0.2
1 + 0.4
1 + -1.1
23 + -0.1
29 + 0.7
29 + 1.2
34 + -1.1
39 + -1.0
39 + 0.2
47 + 0.6
50 + 0.2
50 + -0.8
50 + -4.1
50 + -0.3
50 - -1.7
51 + 0.7
61 + -0.4
62 + 0.0
96 + 0.3
116 + -0.5
158 - -2.2
159 - -0.3
160 - 0.9
169 - -0.4
180 - -0.9
189 + -0.8
198 + 0.4
201 - 1.7
208 - 0.6
210 + -0.5
225 + 13762 mRNA_5394 0.11 -1.1
225 + 13762 mRNA_5394 0.11 2.3
244 + 13762 mRNA_5394 0.13 -2.8
245 - 13762 mRNA_5394 0.13 0.2
271 - 13762 mRNA_5394 0.16 1.3
276 - 13762 mRNA_5394 0.16 -3.8
277 + 13762 mRNA_5394 0.16 0.8
280 - 13762 mRNA_5394 0.17 0.1
306 + 13762 mRNA_5394 0.19 0.2
317 - 13762 mRNA_5394 0.21 -1.6
345 + 13762 mRNA_5394 0.23 -3.4
345 - 13762 mRNA_5394 0.23 -2.3
347 + 13762 mRNA_5394 0.24 0.7
359 - 13762 mRNA_5394 0.25 1.7
387 - 13762 mRNA_5394 0.28 -1.1
399 + 13762 mRNA_5394 0.29 -0.0
434 + 13762 mRNA_5394 0.33 1.2
447 - 13762 mRNA_5394 0.34 0.4
485 - 13762 mRNA_5394 0.38 0.0
543 + 13762 mRNA_5394 0.44 -0.0
649 + 13762 mRNA_5394 0.55 1.1
667 + 13762 mRNA_5394 0.57 0.4
667 - 13762 mRNA_5394 0.57 0.1
678 - 13762 mRNA_5394 0.58 -1.8
718 + 13762 mRNA_5394 0.63 1.1
723 + 13762 mRNA_5394 0.63 2.0
802 + 13762 mRNA_5394 0.71 0.8
806 + 13762 mRNA_5394 0.72 -1.3
905 - 13762 mRNA_5394 0.82 0.2
911 + 13762 mRNA_5394 0.83 1.3
965 + 13762 mRNA_5394 0.88 -3.2
966 + 13762 mRNA_5394 0.89 -0.3
968 + 13762 mRNA_5394 0.89 2.1
1,014 - -1.1
1,084 - 1.7
1,103 - 0.2
1,110 + -0.5
1,245 - 13763 mRNA_5395 0.11 -0.3
1,260 - 13763 mRNA_5395 0.13 -0.4
1,376 - 13763 mRNA_5395 0.27 -0.1
1,438 + 13763 mRNA_5395 0.34 -0.3
1,438 + 13763 mRNA_5395 0.34 0.2
1,438 + 13763 mRNA_5395 0.34 0.5
1,523 + 13763 mRNA_5395 0.44 -0.3
1,528 - 13763 mRNA_5395 0.45 0.4
1,533 + 13763 mRNA_5395 0.45 0.2
1,538 + 13763 mRNA_5395 0.46 1.4
1,538 - 13763 mRNA_5395 0.46 0.6
1,556 + 13763 mRNA_5395 0.48 1.4
1,639 + 13763 mRNA_5395 0.58 0.3
1,854 - 13763 mRNA_5395 0.83 -0.3
1,855 - 13763 mRNA_5395 0.83 0.0
1,887 - 13763 mRNA_5395 0.87 1.6
1,908 - 13763 mRNA_5395 0.89 0.3
2,000 - -0.0
2,009 + 0.5