Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5351

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5350: 13718 - K20310 TRAPPC13 trafficking protein particle complex subunit 13, at 515714 to 517641 13718 mRNA_5351: 13719 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 518393 to 520382 13719

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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517,404 + 13718 mRNA_5350 0.88 2.5
517,539 - -0.1
517,874 + 1.1
518,005 + 1.2
518,015 + -1.8
518,023 - 2.1
518,056 + -0.2
518,075 + -0.8
518,083 - 1.1
518,098 + 1.8
518,112 - 0.3
518,114 + 0.9
518,118 + -1.2
518,119 - 0.0
518,123 - 0.9
518,142 + 0.3
518,157 - -0.0
518,158 + -1.1
518,159 + 0.5
518,169 + 0.3
518,181 - -1.5
518,186 - -0.3
518,191 + 1.3
518,195 - 0.7
518,198 - -0.1
518,203 - -1.0
518,203 - 0.2
518,207 - -1.3
518,209 - -3.1
518,211 + -1.8
518,212 - -0.0
518,228 + 0.7
518,230 - 0.8
518,239 - -0.7
518,244 - 0.1
518,247 + -0.7
518,249 - -2.2
518,289 + 0.4
518,291 + 1.3
518,292 - -0.4
518,301 - 1.4
518,302 - -0.7
518,305 - 2.2
518,324 + 0.0
518,325 + -0.3
518,329 + -0.4
518,419 - 0.1
518,425 + 0.6
518,455 - -1.3
518,583 + 0.6
518,652 - 13719 mRNA_5351 0.13 1.2
518,746 - 13719 mRNA_5351 0.18 1.4
518,870 - 13719 mRNA_5351 0.24 0.8
518,887 + 13719 mRNA_5351 0.25 -0.0
519,010 + 13719 mRNA_5351 0.31 0.0
519,165 - 13719 mRNA_5351 0.39 -0.5
519,309 - 13719 mRNA_5351 0.46 0.6
519,313 + 13719 mRNA_5351 0.46 0.8
519,380 - 13719 mRNA_5351 0.50 0.3
519,447 + 13719 mRNA_5351 0.53 1.1
519,637 + 13719 mRNA_5351 0.63 0.2
519,663 + 13719 mRNA_5351 0.64 1.2
519,774 + 13719 mRNA_5351 0.69 -0.6
519,933 - 13719 mRNA_5351 0.77 -0.2
520,019 - 13719 mRNA_5351 0.82 -0.5
520,064 + 13719 mRNA_5351 0.84 -1.4
520,344 + 0.5
520,453 - 0.8
520,453 - -0.9
520,464 + 0.5
520,473 + -0.2
520,521 - -0.1
520,524 + -1.2
520,538 - -0.3
520,678 - -1.6
520,935 + 0.5
520,943 - 1.3
520,953 + -2.2
520,953 - -1.8
520,955 + 0.1
520,965 - -1.3
521,092 - 1.8
521,100 - 0.1
521,126 + -0.0
521,249 + -0.3
521,282 - -0.7
521,306 - -1.5
521,317 - 0.5