Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5330

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5330: 13698 - BLAST ZYRO0C04598p [Zygosaccharomyces rouxii], at 471272 to 473464 13698 mRNA_5331: 13699 - SUPERFAMILY--SSF52047, at 473951 to 475290 13699

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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470,875 + 0.0
470,877 - 0.9
470,879 + 0.4
471,012 - 0.9
471,040 + -0.5
471,054 - 0.3
471,057 + 0.6
471,060 - 0.5
471,060 - -0.0
471,062 - 0.7
471,202 - 1.1
471,224 - 0.0
471,608 + 13698 mRNA_5330 0.15 0.2
471,664 + 13698 mRNA_5330 0.18 -0.5
471,793 + 13698 mRNA_5330 0.24 -0.6
472,047 + 13698 mRNA_5330 0.35 2.6
472,234 - 13698 mRNA_5330 0.44 0.8
472,823 + 13698 mRNA_5330 0.71 2.3
472,838 + 13698 mRNA_5330 0.71 0.9
473,156 - 13698 mRNA_5330 0.86 0.1
473,251 - -1.6
473,302 + 1.8
473,303 - -1.4
473,576 - -0.3
473,576 - 0.1
473,576 + -0.3
473,578 - -1.9
473,580 - 0.6
473,582 - 1.8
473,585 + 2.0
473,589 - -1.3
473,601 - 0.8
473,729 + 0.2
473,859 + 1.4
473,873 + -0.1
473,887 - 1.1
474,023 - -0.4
474,303 - 13699 mRNA_5331 0.26 -0.1
474,313 + 13699 mRNA_5331 0.27 -0.1
474,316 + 13699 mRNA_5331 0.27 0.1
474,319 + 13699 mRNA_5331 0.27 1.7
474,407 - 13699 mRNA_5331 0.34 0.5
474,460 + 13699 mRNA_5331 0.38 -0.4