Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5311

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5310: 13678 - Hypothetical Protein, at 425565 to 427309 13678 mRNA_5311: 13679 - Hypothetical Protein, at 427613 to 428578 13679 mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429063 to 429953 13680

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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426,640 + 13678 mRNA_5310 0.62 0.2
426,642 - 13678 mRNA_5310 0.62 -1.5
426,709 + 13678 mRNA_5310 0.66 0.2
427,160 + 1.1
427,240 - 0.2
427,241 + 0.3
427,261 + 0.4
427,314 - -0.4
427,323 - 0.0
427,361 - 1.5
427,364 - -1.2
427,388 - 1.7
427,472 + 1.5
427,487 - 2.2
427,513 + -0.4
427,529 - -1.4
427,548 + 0.0
427,587 - -0.7
427,604 + 0.6
427,620 - 0.1
427,628 - 0.0
427,665 - -1.0
427,667 + 1.3
427,671 + -0.3
427,710 + 13679 mRNA_5311 0.10 -1.0
427,744 + 13679 mRNA_5311 0.14 0.0
427,843 + 13679 mRNA_5311 0.24 -0.5
428,068 - 13679 mRNA_5311 0.47 0.4
428,075 + 13679 mRNA_5311 0.48 -0.6
428,106 - 13679 mRNA_5311 0.51 0.2
428,203 + 13679 mRNA_5311 0.61 0.4
428,218 - 13679 mRNA_5311 0.63 0.4
428,251 - 13679 mRNA_5311 0.66 0.9
428,453 + 13679 mRNA_5311 0.87 -0.8
428,468 - 13679 mRNA_5311 0.89 1.3
428,487 + 0.2
428,635 + -0.8
428,650 + 0.8
428,654 - 0.0
428,664 + 2.4
428,671 - -1.3
428,705 + 1.5
428,720 - -0.3
428,778 - -0.4
428,779 + -0.8
428,781 + -0.2
428,783 + 0.0
428,785 + 0.2
428,787 - 0.1
428,797 - -1.8
428,799 + -2.8
428,800 - 0.5
428,802 - -1.1
428,818 - -0.1
428,819 - -1.8
428,824 - 0.6
428,825 + 2.2
428,827 + 0.2
428,829 + 0.9
428,830 - 0.0
428,836 - 1.6
428,837 + 0.9
428,846 - -0.2
428,898 + 1.2
428,973 + 1.3
429,021 - 0.0