Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5304

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5303: 13671 - K17608 STRN1_3_4 striatin 1/3/4, at 405190 to 408801 13671 mRNA_5304: 13672 - KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230, at 409088 to 413869 13672 mRNA_5305: 13673 - K14859 SSF1_2 ribosome biogenesis protein SSF1/2, at 414349 to 416763 13673

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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408,182 - 13671 mRNA_5303 0.83 2.1
408,485 + -0.2
408,522 + -0.8
408,525 + 0.7
408,596 + -0.0
408,806 + 1.1
408,881 - 1.2
409,158 - -0.8
409,176 + 0.5
409,330 - 0.2
409,336 + -0.9
409,363 - -0.5
409,682 + 13672 mRNA_5304 0.12 -0.1
409,865 - 13672 mRNA_5304 0.16 0.4
409,905 - 13672 mRNA_5304 0.17 0.9
409,919 + 13672 mRNA_5304 0.17 0.3
410,072 + 13672 mRNA_5304 0.21 1.7
410,108 - 13672 mRNA_5304 0.21 -0.4
410,263 + 13672 mRNA_5304 0.25 0.3
410,452 - 13672 mRNA_5304 0.29 -0.1
410,544 + 13672 mRNA_5304 0.30 -0.2
410,587 - 13672 mRNA_5304 0.31 -1.5
411,333 + 13672 mRNA_5304 0.47 1.8
411,356 - 13672 mRNA_5304 0.47 -0.5
411,614 - 13672 mRNA_5304 0.53 0.3
411,748 + 13672 mRNA_5304 0.56 0.9
412,087 + 13672 mRNA_5304 0.63 -2.0
412,479 - 13672 mRNA_5304 0.71 0.2
412,885 + 13672 mRNA_5304 0.79 0.1
413,378 - 13672 mRNA_5304 0.90 1.0
413,495 + 0.6
413,645 - 0.8
413,918 + 1.6
413,942 - 0.6
414,232 + -0.4
414,245 - -0.2