Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5299

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5298: 13666 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 386412 to 388025 13666 mRNA_5299: 13667 - BLAST RNA polymerase sigma factor, sigma-70 family [Rho..., at 388361 to 391277 13667 mRNA_5300: 13668 - K03023 RPC3, POLR3C DNA-directed RNA polymerase III subunit RPC3, at 391828 to 394452 13668

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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387,997 + 0.6
388,120 - 0.2
388,124 - -0.5
388,270 + 0.7
388,273 + 0.5
388,273 + 1.0
388,276 + 0.7
388,281 + 0.5
388,286 - -0.4
388,286 + 2.7
388,374 - 0.1
388,400 + 0.2
388,417 - 0.2
388,434 + 0.5
388,444 + -0.4
388,462 + -1.3
388,479 - 0.2
388,719 - 13667 mRNA_5299 0.12 -0.9
388,869 + 13667 mRNA_5299 0.17 -1.6
389,089 + 13667 mRNA_5299 0.25 -0.6
389,141 + 13667 mRNA_5299 0.27 0.9
389,331 + 13667 mRNA_5299 0.33 -0.3
389,498 + 13667 mRNA_5299 0.39 -0.1
389,499 + 13667 mRNA_5299 0.39 -0.4
391,267 + -1.8
391,475 - 0.3
391,491 - 1.1
391,786 + 0.3