Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5295

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5294: 13662 - K02830 HRAD1, RAD17 cell cycle checkpoint protein, at 378624 to 380568 13662 mRNA_5295: 13663 - Hypothetical Protein, at 381073 to 381951 13663 mRNA_5296: 13664 - Hypothetical Protein, at 382436 to 382844 13664

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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380,611 - -0.1
380,644 - -0.9
380,665 + 1.3
380,668 + 0.1
380,782 - 0.6
380,929 - 1.8
380,939 - 0.4
380,949 + -0.7
380,996 - 1.0
381,182 - 13663 mRNA_5295 0.12 -0.2
381,627 + 13663 mRNA_5295 0.63 -1.1
381,637 + 13663 mRNA_5295 0.64 1.1
381,659 + 13663 mRNA_5295 0.67 -1.6
381,661 - 13663 mRNA_5295 0.67 0.2
381,781 + 13663 mRNA_5295 0.81 -1.6
381,782 - 13663 mRNA_5295 0.81 -0.1
381,796 - 13663 mRNA_5295 0.82 -1.2
381,809 + 13663 mRNA_5295 0.84 -0.9
381,812 - 13663 mRNA_5295 0.84 0.9
381,813 - 13663 mRNA_5295 0.84 0.4
381,820 - 13663 mRNA_5295 0.85 -0.8
381,880 - -0.7
381,933 - -1.3
381,944 - 0.1
381,955 - 0.8
381,956 + 1.5
381,967 - 0.8
382,042 - 1.1
382,093 + 1.1
382,097 + 0.4
382,103 + -1.0
382,106 + -0.3
382,114 + 0.3
382,205 - 0.9
382,232 + -1.5
382,255 - 0.9
382,276 - 0.6
382,281 + -0.6
382,353 - 1.0
382,354 + -0.4
382,379 + -0.7
382,386 + 0.5
382,561 + 13664 mRNA_5296 0.31 0.1
382,614 + 13664 mRNA_5296 0.44 -0.2
382,638 - 13664 mRNA_5296 0.49 0.6
382,656 + 13664 mRNA_5296 0.54 -0.7
382,747 + 13664 mRNA_5296 0.76 -0.4
382,809 - 0.0
382,812 - 0.7
382,813 + 0.2
382,814 - 0.1
382,823 - 1.0
382,823 - 0.6
382,824 - 1.1
382,848 - 0.1
382,864 - 0.4
382,869 + 0.4
382,874 - -0.2
382,879 + -1.5
382,882 - -1.4
382,883 + -0.8
382,885 - 1.6
382,907 - -1.5
382,911 + -1.5
382,912 - 1.0
382,921 + 0.9