Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5257

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5257: 13625 - K11887 PAAF1, RPN14 proteasomal ATPase-associated factor 1, at 295850 to 297525 13625 mRNA_5258: 13626 - KOG0538 Glycolate oxidase, at 297725 to 299742 13626

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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294,861 + -0.5
294,974 + -0.5
295,112 + -0.4
295,273 + -0.5
295,386 + -2.5
295,812 - 1.8
295,969 + -0.4
296,638 + 13625 mRNA_5257 0.47 1.3
296,951 - 13625 mRNA_5257 0.66 1.2
296,975 + 13625 mRNA_5257 0.67 -0.4
297,151 + 13625 mRNA_5257 0.78 -0.7
297,423 + 0.3
297,786 + -0.1
297,834 - 0.4
297,842 + -1.3
297,899 + -0.3
298,098 - 13626 mRNA_5258 0.18 0.9
298,128 - 13626 mRNA_5258 0.20 -0.3
298,128 - 13626 mRNA_5258 0.20 -0.0
298,239 + 13626 mRNA_5258 0.25 -1.5
298,291 + 13626 mRNA_5258 0.28 0.2