Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5215

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164395 to 166467 13582 mRNA_5215: 13583 - KOG1940 Zn-finger protein, at 166614 to 167435 13583 mRNA_5217: 13585 - Hypothetical Protein, at 167751 to 168514 13585

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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165,701 - 13582 mRNA_5214 0.63 1.3
165,858 + 13582 mRNA_5214 0.71 -1.9
165,948 + 13582 mRNA_5214 0.75 -0.8
166,072 + 13582 mRNA_5214 0.81 -1.9
166,118 - 13582 mRNA_5214 0.83 -1.2
166,235 + 13582 mRNA_5214 0.89 -0.7
166,253 - 13582 mRNA_5214 0.90 -0.5
166,276 - -0.0
166,355 + 0.2
166,394 + -0.1
166,407 + 0.6
166,408 + -0.2
166,755 + 13583 mRNA_5215 0.17 -0.7
167,243 + 13583 mRNA_5215 0.77 0.1
167,536 - 2.6
167,984 + 13585 mRNA_5217 0.30 1.1
168,036 + 13585 mRNA_5217 0.37 -0.8
168,141 - 13585 mRNA_5217 0.51 0.2
168,170 - 13585 mRNA_5217 0.55 -0.8
168,417 - 13585 mRNA_5217 0.87 1.2
168,429 - 13585 mRNA_5217 0.89 -1.2