Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5212

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5211: 13579 - BLAST related to UPF0768 protein YBL029C-A [Zygosaccharomyc..., at 158362 to 159031 13579 mRNA_5212: 13580 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 159635 to 162568 13580 mRNA_5213: 13581 - Hypothetical Protein, at 163193 to 164200 13581

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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158,736 - 13579 mRNA_5211 0.56 0.2
158,760 + 13579 mRNA_5211 0.59 -0.0
159,192 - 1.1
159,462 + -0.9
160,335 - 13580 mRNA_5212 0.24 1.3
160,426 + 13580 mRNA_5212 0.27 0.2
160,785 + 13580 mRNA_5212 0.39 0.6
161,192 + 13580 mRNA_5212 0.53 0.7
161,212 + 13580 mRNA_5212 0.54 0.8
161,227 + 13580 mRNA_5212 0.54 0.2
161,359 - 13580 mRNA_5212 0.59 1.0
161,482 - 13580 mRNA_5212 0.63 0.2
162,052 + 13580 mRNA_5212 0.82 -0.2
162,534 - -0.5
162,659 + -0.4
162,665 - 0.3
162,667 + 0.0
162,673 - -0.4
162,673 + -0.5
162,673 + 1.1
162,684 - 0.1
162,686 + -0.6
162,688 + -0.5
162,690 - 1.3
162,709 - 0.5
162,712 + -0.4
162,713 - -0.1
162,713 - -1.6
162,713 + 0.5
162,716 + -0.4
162,718 + -1.2
162,720 + 0.9
162,742 - -0.3
162,748 + 0.1
162,761 - 0.1
162,779 - 1.1
162,782 - -2.0
162,792 - -0.1
162,806 - 0.8
162,807 - 0.4
162,822 + -0.6
162,835 - -0.5
162,863 + 0.7
162,879 + -0.9
162,981 + -1.5
163,070 - -0.3
163,385 + 13581 mRNA_5213 0.19 -0.2
163,453 - 13581 mRNA_5213 0.26 -1.1