Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5211

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5210: 13578 - KOG3221 Glycolipid transfer protein, at 156736 to 157976 13578 mRNA_5211: 13579 - BLAST related to UPF0768 protein YBL029C-A [Zygosaccharomyc..., at 158362 to 159031 13579 mRNA_5212: 13580 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 159635 to 162568 13580

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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158,164 + -0.3
158,168 + 0.1
158,282 + 2.4
158,300 + 0.4
158,329 + 1.4
158,446 + 13579 mRNA_5211 0.13 0.4
158,622 - 13579 mRNA_5211 0.39 0.5
158,736 - 13579 mRNA_5211 0.56 0.2
158,760 + 13579 mRNA_5211 0.59 -0.0
159,192 - 1.1
159,462 + -0.9