Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5198

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5197: 13565 - Hypothetical Protein, at 129115 to 130730 13565 mRNA_5198: 13566 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 131412 to 133498 13566 mRNA_5199: 13567 - K01210 E3.2.1.58 glucan 1,3-beta-glucosidase, at 133607 to 137030 13567

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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130,415 - 13565 mRNA_5197 0.80 0.3
130,804 - 2.7
130,808 + 0.5
130,835 - 1.3
130,950 - -0.3
130,965 - -0.6
131,021 - -1.3
131,100 + 0.1
131,117 + 0.0
131,129 - -2.4
131,138 + 0.9
131,143 - 0.3
131,144 + 2.2
131,149 + -1.2
131,169 + -1.0
131,169 + 1.9
131,182 + 0.4
131,186 + 2.2
131,186 + 0.1
131,187 + -0.4
131,208 + -1.6
131,211 + -0.3
131,217 - -0.2
131,217 - -0.2
131,227 - 0.2
131,227 - 3.4
131,240 + 0.1
131,264 - -0.5
131,275 - 0.4
131,277 + 0.3
131,289 - 0.4
131,307 - 0.9
131,320 + -2.0
131,325 - 0.8
131,356 + -1.0
131,375 - 0.3
131,439 - -0.8
131,442 + -0.1
131,521 + -0.5
131,631 + 13566 mRNA_5198 0.10 0.8
131,741 + 13566 mRNA_5198 0.16 0.2
131,764 + 13566 mRNA_5198 0.17 -0.0
131,847 - 13566 mRNA_5198 0.21 -0.1
132,120 + 13566 mRNA_5198 0.34 0.5
132,234 - 13566 mRNA_5198 0.39 1.0
132,289 - 13566 mRNA_5198 0.42 2.2
132,743 + 13566 mRNA_5198 0.64 -0.6
132,984 - 13566 mRNA_5198 0.75 -0.5
133,143 - 13566 mRNA_5198 0.83 -0.2
133,524 + -0.4
133,552 + -0.3
133,626 - 1.9
133,643 - 0.7
133,665 - 0.5
133,684 - 1.4
133,695 + 1.2
133,736 + 0.3
133,739 + 1.9
133,902 - -0.6
134,473 - 13567 mRNA_5199 0.25 -0.4