Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5172

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5172: 13540 - BLAST similar to An11g07040 [Aspergillus kawachii IFO 4308], at 70106 to 71183 13540

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
69,193 - -0.6
69,193 - -3.7
69,200 + -0.7
69,208 - -0.3
69,327 - 0.3
69,331 - -2.0
69,333 - -0.4
69,337 - -1.0
69,338 + 0.6
69,351 + -2.2
69,355 + -0.9
69,462 - -1.9
69,476 + -0.9
69,499 + -0.1
69,500 - -0.7
69,502 + -0.8
69,503 - -0.1
69,511 + 1.7
69,519 + 0.0
69,643 - 1.0
69,643 + 0.2
69,643 + 2.5
69,645 + -0.2
69,646 - 0.9
69,650 - -1.5
69,652 + 0.4
69,652 + -1.1
69,653 + -0.2
69,653 + -0.6
69,656 + -1.5
69,676 + 0.5
69,690 + 0.3
69,694 + -0.8
69,696 + 1.1
69,698 - -2.6
69,710 - 0.0
69,730 - 0.2
69,732 + 1.0
69,734 + 0.8
69,737 - -0.8
69,742 + 0.5
69,746 + -0.3
69,749 + 0.2
69,761 + -0.6
69,762 + 0.6
69,770 - 0.7
69,779 - -1.4
69,782 + 0.3
69,788 + -0.2
69,840 - 2.7
69,853 - -0.2
69,864 + -0.8
70,124 + 0.2
70,141 + 0.1
70,147 - -1.5
70,148 + 1.5
70,161 + -1.9
70,163 - -0.9
70,164 + 0.1
70,274 - 13540 mRNA_5172 0.16 0.5
70,278 - 13540 mRNA_5172 0.16 1.3
70,323 - 13540 mRNA_5172 0.20 -0.2
70,427 - 13540 mRNA_5172 0.30 -0.2
70,457 - 13540 mRNA_5172 0.33 0.3
70,508 + 13540 mRNA_5172 0.37 -0.0
70,550 + 13540 mRNA_5172 0.41 -1.4
70,551 - 13540 mRNA_5172 0.41 0.8
70,554 + 13540 mRNA_5172 0.42 -0.5
70,558 - 13540 mRNA_5172 0.42 -0.0
70,603 - 13540 mRNA_5172 0.46 -1.5
70,621 - 13540 mRNA_5172 0.48 -0.8
70,621 - 13540 mRNA_5172 0.48 -0.1
70,687 - 13540 mRNA_5172 0.54 0.3
70,702 - 13540 mRNA_5172 0.55 0.4
70,709 + 13540 mRNA_5172 0.56 0.5
70,762 - 13540 mRNA_5172 0.61 0.9
70,797 + 13540 mRNA_5172 0.64 1.0
70,811 + 13540 mRNA_5172 0.65 -0.5
70,825 - 13540 mRNA_5172 0.67 -0.5
70,831 + 13540 mRNA_5172 0.67 -0.0
70,842 - 13540 mRNA_5172 0.68 0.3
70,863 + 13540 mRNA_5172 0.70 0.1
70,863 - 13540 mRNA_5172 0.70 0.8
70,863 + 13540 mRNA_5172 0.70 0.9
70,872 - 13540 mRNA_5172 0.71 -0.4
70,876 - 13540 mRNA_5172 0.71 0.0
70,876 + 13540 mRNA_5172 0.71 0.2
70,877 + 13540 mRNA_5172 0.72 -0.3
70,880 + 13540 mRNA_5172 0.72 1.0
70,887 + 13540 mRNA_5172 0.72 -0.2
70,890 - 13540 mRNA_5172 0.73 1.0
70,894 - 13540 mRNA_5172 0.73 0.6
70,895 + 13540 mRNA_5172 0.73 0.1
70,896 - 13540 mRNA_5172 0.73 0.2
70,896 - 13540 mRNA_5172 0.73 0.0
70,898 + 13540 mRNA_5172 0.73 1.7
70,919 - 13540 mRNA_5172 0.75 0.7
70,928 + 13540 mRNA_5172 0.76 -1.0
70,932 + 13540 mRNA_5172 0.77 1.3
70,935 + 13540 mRNA_5172 0.77 -1.2
70,941 - 13540 mRNA_5172 0.77 -0.7
70,954 + 13540 mRNA_5172 0.79 -0.4
70,993 - 13540 mRNA_5172 0.82 -0.6
70,997 - 13540 mRNA_5172 0.83 1.1
71,023 + 13540 mRNA_5172 0.85 2.2
71,024 + 13540 mRNA_5172 0.85 -1.4
71,038 + 13540 mRNA_5172 0.86 -0.3
71,042 + 13540 mRNA_5172 0.87 0.1
71,042 + 13540 mRNA_5172 0.87 1.6
71,048 - 13540 mRNA_5172 0.87 2.0
71,065 + 13540 mRNA_5172 0.89 0.7
71,074 + 13540 mRNA_5172 0.90 -1.4
71,121 - 0.4
71,166 + -0.2
71,171 + 0.4
71,172 + -0.3
71,205 - 1.5
71,291 - 0.9
71,304 - 1.8
71,306 + 1.2
71,308 - -0.2
71,309 + -0.1
71,310 + 0.2
71,312 - -0.3
71,316 + -0.5
71,317 + 0.3
71,318 + -1.4
71,319 + 0.1
71,320 + 1.4
71,321 - 1.3
71,322 - -0.9
71,322 + 1.3
71,327 + 0.1
71,327 - -1.1
71,330 - 0.5
71,332 - 0.0
71,337 + 0.1
71,338 - -1.4
71,338 + 0.1
71,338 + 0.1
71,342 + 0.8
71,343 - 0.4
71,345 - 0.5
71,346 + -0.4
71,347 + -0.2
71,347 + 1.0
71,348 - -1.2
71,348 + 0.3
71,349 - -0.6
71,350 + 0.3
71,350 - 1.8
71,351 - 1.5
71,352 + -0.1
71,352 + 0.0
71,352 + -0.1
71,354 + 0.7
71,355 - -2.0
71,355 - -0.2
71,360 - -0.7
71,363 + 1.1
71,365 + 0.0
71,367 + -0.2
71,367 + 1.0
71,368 - 0.1
71,369 + -0.5
71,369 + 0.8
71,371 + 0.8
71,372 + 0.1
71,374 - 1.0
71,374 - -0.2
71,396 - 0.6
71,397 + 0.4
71,405 - 1.2
71,410 + 0.7
71,413 + 0.6
71,414 + -0.1
71,414 - -0.5
71,416 - -0.9
71,417 + -2.7
71,418 - -0.8
71,419 - -0.5
71,422 + 1.2
71,430 + -0.3
71,430 + -0.0
71,432 + -1.8
71,432 - 0.0
71,433 - 0.0
71,435 - -0.8
71,435 - -1.6
71,435 + -1.1
71,436 - -1.9
71,436 - -0.2
71,436 + -1.2
71,441 + -0.0
71,441 + 0.6
71,443 - 0.2
71,444 + -1.5
71,450 + 0.3
71,451 + -0.1
71,451 + -0.1
71,452 - 0.3
71,452 + -0.5
71,452 + -0.2
71,456 + -0.0
71,458 + 0.2
71,459 - 0.2
71,463 - -0.9
71,465 - 0.3
71,473 - -0.4
71,482 - 1.1
71,504 + 0.2
71,513 - -0.7
71,530 - -0.0
71,531 - -0.3
71,534 - 0.4
71,543 + 0.4
71,544 - -1.4
71,544 - 1.3
71,559 - -0.6
71,560 - -0.4
71,560 - 2.6
71,568 + 0.7
71,574 + 1.5
71,575 - 0.7
71,577 - -1.3
71,581 + -0.0
71,585 - -0.2
71,594 + -1.0
71,604 + 0.4
71,604 - 0.4
71,634 + -0.7
71,634 - 0.7
71,636 + 0.1
71,640 - 1.0
71,678 - -1.0
71,699 + -0.2
71,706 + -1.2
71,727 - 1.8
71,727 - -0.6
71,731 + 0.0
71,731 + 0.2
71,732 + 1.2
71,735 + 0.5
71,736 + -0.9
71,740 + -1.2
71,741 - 0.9
71,744 + 0.0
71,745 + -0.2
71,751 + -0.3
71,751 - 0.8
71,752 - -0.3
71,757 - -0.3
71,762 - -0.3
71,764 + -0.7
71,771 - 2.7
71,774 - 0.0
71,775 - -1.0
71,776 + -1.1
71,782 - 0.8
71,783 - 0.7
71,789 + -0.6
71,790 - -1.3
71,793 + 0.0
71,797 - 0.2
71,797 + 0.5
71,797 + -0.8
71,798 + 0.4
71,803 - 0.9
71,804 - 0.8
71,805 + -0.1
71,829 + 0.3
71,837 - 0.5
71,837 + 0.1
71,849 + -2.5
71,852 + -0.5
71,853 - 1.2
71,862 + 0.8
71,862 + 0.3
71,863 - 1.2
71,865 + -3.2
71,866 + -1.4
71,868 + -0.2
71,868 + 0.4
71,869 - 0.0
71,877 - 0.4
71,962 - 0.0
71,965 - 1.1
71,990 - 1.3
71,995 + 1.3
72,003 + 2.5
72,006 + 0.1
72,012 - -0.5
72,013 - -0.9
72,014 - -0.5
72,028 + 0.2
72,035 - 0.2
72,146 - -0.1
72,146 - -0.1
72,146 - -1.1
72,150 - 0.4
72,163 + -0.5