Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5164

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5163: 13531 - Hypothetical Protein, at 48190 to 49744 13531 mRNA_5164: 13532 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 50171 to 51821 13532 mRNA_5165: 13533 - Hypothetical Protein, at 52326 to 52658 13533

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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49,265 + 13531 mRNA_5163 0.69 -0.6
49,292 - 13531 mRNA_5163 0.71 0.8
49,324 + 13531 mRNA_5163 0.73 0.0
49,385 + 13531 mRNA_5163 0.77 -0.4
49,489 + 13531 mRNA_5163 0.84 -0.7
49,627 + 0.1
49,710 + 0.8
49,776 - -1.4
49,793 + -0.7
50,191 - -1.0
50,200 + -0.3
50,607 - 13532 mRNA_5164 0.26 2.2
50,732 - 13532 mRNA_5164 0.34 -0.1
51,158 - 13532 mRNA_5164 0.60 0.4
51,173 + 13532 mRNA_5164 0.61 -0.2
51,441 + 13532 mRNA_5164 0.77 0.5
51,838 + 1.9
51,855 + 0.2
51,875 - 0.0
51,878 - -0.5
51,881 - -0.2
51,939 + 1.9
51,959 + 0.8
52,043 - 1.6
52,043 - 0.4
52,057 + -0.2
52,061 - -1.1
52,070 + -0.0
52,071 + 1.3
52,073 - 0.1
52,087 - 0.6
52,203 + -1.2
52,228 - -0.8
52,359 + -0.7
52,371 - 13533 mRNA_5165 0.14 -0.6
52,372 + 13533 mRNA_5165 0.14 -1.7
52,438 + 13533 mRNA_5165 0.34 -0.1
52,453 + 13533 mRNA_5165 0.38 -0.7
52,460 - 13533 mRNA_5165 0.40 0.2
52,486 - 13533 mRNA_5165 0.48 0.3
52,507 - 13533 mRNA_5165 0.54 -0.2
52,510 - 13533 mRNA_5165 0.55 0.3
52,510 - 13533 mRNA_5165 0.55 1.6
52,517 + 13533 mRNA_5165 0.57 -1.4
52,520 + 13533 mRNA_5165 0.58 -0.6
52,522 + 13533 mRNA_5165 0.59 -0.6
52,523 + 13533 mRNA_5165 0.59 -0.6
52,524 - 13533 mRNA_5165 0.59 1.8
52,528 + 13533 mRNA_5165 0.61 1.6
52,530 - 13533 mRNA_5165 0.61 -0.0
52,536 + 13533 mRNA_5165 0.63 0.3
52,536 - 13533 mRNA_5165 0.63 -0.8
52,538 - 13533 mRNA_5165 0.64 -0.2
52,542 + 13533 mRNA_5165 0.65 -0.8
52,543 + 13533 mRNA_5165 0.65 -1.4
52,560 + 13533 mRNA_5165 0.70 1.1
52,560 + 13533 mRNA_5165 0.70 1.9
52,561 + 13533 mRNA_5165 0.71 0.3
52,567 - 13533 mRNA_5165 0.72 0.2
52,574 - 13533 mRNA_5165 0.74 -1.0
52,577 + 13533 mRNA_5165 0.75 -1.7
52,581 - 13533 mRNA_5165 0.77 -0.0
52,582 + 13533 mRNA_5165 0.77 -0.1
52,583 - 13533 mRNA_5165 0.77 -0.8
52,584 + 13533 mRNA_5165 0.77 0.2
52,586 + 13533 mRNA_5165 0.78 1.3
52,596 - 13533 mRNA_5165 0.81 0.6
52,603 - 13533 mRNA_5165 0.83 1.5
52,648 - -0.1
52,814 + 0.6