Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5151

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5151: 13519 - HMMPfam-SUR7/PalI family-PF06687, at 22943 to 24220 13519 mRNA_5152: 13520 - HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281, at 24796 to 26164 13520

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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22,144 + -0.5
22,149 - 0.5
22,252 - -0.6
22,252 - 1.7
22,252 - 0.4
22,252 - 0.1
22,314 + -0.5
22,518 - -0.4
22,829 + 0.5
22,966 - 0.4
23,139 + 13519 mRNA_5151 0.15 0.7
23,276 - 13519 mRNA_5151 0.26 3.3
23,284 + 13519 mRNA_5151 0.27 0.4
23,554 - 13519 mRNA_5151 0.48 0.3
23,558 + 13519 mRNA_5151 0.48 1.1
24,019 - 13519 mRNA_5151 0.84 1.6
24,139 + -1.0
24,144 - -0.5
24,149 - 0.6
24,153 + 0.4
24,153 - 0.1
24,155 - -0.8
24,160 - 0.6
24,162 + 1.6
24,164 + -1.6
24,166 + 1.8
24,177 + 0.6
24,184 + 0.6
24,292 - 2.1
24,301 + 1.0
24,307 + 0.8
24,346 + -0.1
24,362 - -0.5
24,369 - -1.4
24,450 - -0.9
24,463 + 1.3
24,465 + 0.6
24,476 + -0.0
24,488 + -0.0
24,518 + -0.3
24,519 - -0.4
24,521 - 0.5
24,528 + -0.3
24,572 - 0.1
24,649 + -0.7
24,743 + -1.0
24,910 + -0.5
24,913 + 0.7
25,051 + 13520 mRNA_5152 0.19 0.8
25,217 + 13520 mRNA_5152 0.31 -0.6