Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5099

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5098: 13466 - K08065 NFYB nuclear transcription Y subunit beta, at 1747637 to 1748369 13466 mRNA_5099: 13467 - Hypothetical Protein, at 1749217 to 1750028 13467 mRNA_5100: 13468 - Hypothetical Protein, at 1750173 to 1750911 13468

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,748,335 - 0.2
1,748,345 - 0.1
1,748,346 + 0.2
1,748,372 - 1.0
1,748,375 + 0.4
1,748,463 - 0.6
1,748,479 - 0.2
1,748,480 - -0.1
1,748,480 + 1.9
1,748,489 + -0.6
1,748,489 + 0.7
1,748,522 - -1.8
1,748,575 - 0.2
1,748,639 - 1.3
1,748,644 + 1.5
1,748,668 + 1.8
1,748,676 - 0.6
1,748,681 - -0.2
1,748,686 + -2.8
1,748,686 + -0.0
1,748,687 - -1.3
1,748,688 - 1.2
1,748,693 - 0.2
1,748,694 - 1.1
1,748,700 - 1.6
1,748,701 + 0.3
1,748,706 + -0.6
1,748,744 + -0.5
1,748,744 + 0.2
1,748,760 + -0.3
1,748,786 + -2.2
1,748,788 + -1.0
1,748,791 + -0.1
1,748,792 - 0.3
1,748,806 - 0.7
1,748,823 + 0.9
1,748,827 - 0.4
1,748,830 - -0.4
1,748,837 + -0.3
1,748,846 + -0.5
1,748,854 + 0.5
1,748,855 + -0.5
1,748,858 - 0.5
1,748,861 - 1.2
1,748,862 - -0.5
1,748,863 + 2.6
1,748,863 - -0.5
1,748,893 - -0.7
1,748,922 - -0.9
1,748,929 - -0.3
1,748,991 - 0.3
1,749,000 - -0.6
1,749,001 + -0.6
1,749,028 + 0.5
1,749,051 + 0.3
1,749,095 - -0.4
1,749,098 + 2.1
1,749,115 + 0.5
1,749,124 - 0.5
1,749,124 - 0.7
1,749,145 - 1.2
1,749,146 + 0.2
1,749,271 + 0.7
1,749,440 + 13467 mRNA_5099 0.27 1.5
1,749,594 + 13467 mRNA_5099 0.46 -1.4
1,749,596 - 13467 mRNA_5099 0.47 -0.0
1,749,610 + 13467 mRNA_5099 0.48 -0.3
1,749,617 + 13467 mRNA_5099 0.49 0.1
1,749,688 - 13467 mRNA_5099 0.58 0.1
1,749,851 - 13467 mRNA_5099 0.78 -0.1
1,749,863 + 13467 mRNA_5099 0.80 -1.0
1,749,883 - 13467 mRNA_5099 0.82 0.8
1,750,163 + 1.5
1,750,257 - 13468 mRNA_5100 0.11 -1.3
1,750,435 + 13468 mRNA_5100 0.35 0.9
1,750,517 + 13468 mRNA_5100 0.47 -0.5
1,750,570 + 13468 mRNA_5100 0.54 0.8
1,750,627 - 13468 mRNA_5100 0.61 0.5
1,750,703 + 13468 mRNA_5100 0.72 -0.2
1,750,796 - 13468 mRNA_5100 0.84 1.3
1,750,919 - -0.2
1,750,941 - -1.1
1,750,963 - 0.5
1,751,000 + 1.0
1,751,001 + -0.5
1,751,002 - -0.1
1,751,003 + -0.4
1,751,003 + -0.5
1,751,004 - -0.1