Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5033

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5032: 13400 - Hypothetical Protein, at 1597807 to 1600574 13400 mRNA_5033: 13401 - KOG4436 Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains), at 1601468 to 1605781 13401 mRNA_5034: 13402 - KOG4589 Cell division protein FtsJ, at 1606739 to 1607440 13402

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,600,505 + 1.6
1,600,589 - -0.6
1,600,620 - 0.6
1,600,799 + 0.6
1,600,807 + 0.0
1,600,823 - -0.4
1,600,833 - 1.0
1,600,838 + -0.1
1,600,838 + -0.3
1,600,896 - 0.2
1,600,899 + -0.7
1,600,907 - -0.3
1,600,941 + 1.2
1,600,956 + -0.6
1,601,105 + 0.5
1,601,238 - 0.3
1,601,238 - -0.0
1,601,241 + 0.9
1,601,244 + 0.5
1,601,674 - 0.3
1,601,674 + 0.2
1,601,714 + -0.5
1,602,144 + 13401 mRNA_5033 0.16 -2.0
1,602,565 + 13401 mRNA_5033 0.25 0.2
1,602,595 + 13401 mRNA_5033 0.26 0.1
1,603,011 + 13401 mRNA_5033 0.36 -0.3
1,603,724 - 13401 mRNA_5033 0.52 -0.1
1,603,930 + 13401 mRNA_5033 0.57 1.9
1,604,894 - 13401 mRNA_5033 0.79 -0.9
1,604,896 + 13401 mRNA_5033 0.79 -1.4
1,605,088 + 13401 mRNA_5033 0.84 -1.8
1,605,170 + 13401 mRNA_5033 0.86 -0.5
1,605,458 + 0.9
1,605,624 - -0.2
1,606,034 + 0.6
1,606,048 - -0.7
1,606,502 - -0.5
1,606,622 + -1.0