Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4861

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4860: 13228 - K13237 DECR2 peroxisomal 2,4-dienoyl-CoA reductase, at 1164128 to 1165413 13228 mRNA_4861: 13229 - BLAST NADH-ubiquinone oxidoreductase [Sanghuangporus baumii], at 1165741 to 1167081 13229 mRNA_4862: 13230 - K00817 hisC histidinol-phosphate aminotransferase, at 1167194 to 1168610 13230

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,165,238 + 13228 mRNA_4860 0.86 0.8
1,165,248 - 13228 mRNA_4860 0.87 -0.9
1,165,250 + 13228 mRNA_4860 0.87 -0.7
1,165,366 + 0.7
1,165,368 + 0.1
1,165,386 - -0.1
1,165,527 - -0.4
1,165,536 - 0.6
1,165,683 - -0.3
1,165,700 - -1.0
1,165,705 + -0.8
1,165,844 + 1.3
1,165,848 + -0.4
1,165,971 - 13229 mRNA_4861 0.17 -1.3
1,165,997 - 13229 mRNA_4861 0.19 -1.1
1,166,132 + 13229 mRNA_4861 0.29 1.8