Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4809

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4808: 13176 - K12880 THOC3 THO complex subunit 3, at 1061529 to 1063050 13176 mRNA_4809: 13177 - Hypothetical Protein, at 1063200 to 1067794 13177 mRNA_4810: 13178 - KOG1304 Amino acid transporters, at 1068097 to 1069702 13178

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,062,203 + 13176 mRNA_4808 0.44 0.0
1,062,294 + 13176 mRNA_4808 0.50 -0.4
1,062,562 + 13176 mRNA_4808 0.68 -0.7
1,063,025 - -0.4
1,063,243 + 0.5
1,063,276 - 0.6
1,065,878 - 13177 mRNA_4809 0.58 -0.1
1,066,132 + 13177 mRNA_4809 0.64 1.7
1,066,476 - 13177 mRNA_4809 0.71 0.7
1,066,609 - 13177 mRNA_4809 0.74 0.3
1,066,630 - 13177 mRNA_4809 0.75 -0.4
1,066,942 + 13177 mRNA_4809 0.81 0.1
1,066,947 - 13177 mRNA_4809 0.82 2.0
1,066,949 + 13177 mRNA_4809 0.82 -1.8
1,067,520 + -0.3
1,067,689 - -0.1
1,067,692 - -0.1
1,067,801 - 1.0
1,067,812 + 1.8
1,067,826 - 0.0
1,067,833 - -2.4
1,067,840 + 0.8
1,067,841 + -0.7
1,067,842 + -0.0
1,067,851 + 0.3
1,067,970 + 0.2
1,068,016 + -0.3
1,068,095 - 0.7
1,068,123 + 2.1
1,068,142 - 0.7
1,068,285 - 13178 mRNA_4810 0.12 -0.1
1,068,294 + 13178 mRNA_4810 0.12 -1.4
1,068,408 - 13178 mRNA_4810 0.19 -0.1
1,068,422 + 13178 mRNA_4810 0.20 0.4