Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4787

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4786: 13154 - Hypothetical Protein, at 1011001 to 1011498 13154 mRNA_4787: 13155 - SUPERFAMILY--SSF49785, at 1011641 to 1014528 13155 mRNA_4788: 13156 - KOG0143 Iron/ascorbate family oxidoreductases, at 1014741 to 1016024 13156

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
1,010,712 - -1.1
1,010,733 - -1.2
1,010,744 - 0.2
1,010,745 - 0.2
1,010,745 + 0.3
1,010,749 - -0.3
1,010,751 - -0.2
1,010,759 + 0.3
1,010,759 - 0.5
1,010,759 - -2.1
1,010,759 - -0.4
1,010,762 + -0.3
1,010,763 + -0.2
1,010,764 + 0.2
1,010,764 + 0.7
1,010,785 - 1.6
1,010,796 - -0.3
1,010,798 - -0.7
1,010,804 + 0.4
1,010,806 - 0.1
1,010,853 + -0.1
1,010,872 - 0.8
1,010,873 - -0.4
1,010,880 - 0.5
1,010,886 + 0.7
1,010,887 + -0.6
1,010,892 + 0.3
1,010,898 - 0.2
1,010,912 + 0.5
1,010,913 + 0.6
1,010,914 - 1.6
1,010,919 + -1.6
1,010,927 + -0.4
1,010,929 - -2.0
1,010,943 + 1.1
1,010,950 + 2.1
1,010,974 - 1.0
1,010,976 + -1.5
1,010,979 - -0.3
1,010,983 + -0.3
1,010,986 - 0.7
1,010,990 - -0.2
1,011,002 - 0.3
1,011,003 - 0.8
1,011,003 + 1.1
1,011,004 - 1.4
1,011,005 - 3.5
1,011,012 - 0.3
1,011,061 + 13154 mRNA_4786 0.12 -0.3
1,011,089 - 13154 mRNA_4786 0.18 -0.2
1,011,130 - 13154 mRNA_4786 0.26 0.9
1,011,134 + 13154 mRNA_4786 0.27 0.3
1,011,141 + 13154 mRNA_4786 0.28 0.3
1,011,161 + 13154 mRNA_4786 0.32 -0.6
1,011,172 - 13154 mRNA_4786 0.34 1.1
1,011,172 + 13154 mRNA_4786 0.34 0.0
1,011,175 - 13154 mRNA_4786 0.35 1.4
1,011,185 - 13154 mRNA_4786 0.37 0.0
1,011,194 + 13154 mRNA_4786 0.39 -1.6
1,011,197 + 13154 mRNA_4786 0.39 -0.5
1,011,211 - 13154 mRNA_4786 0.42 0.5
1,011,214 - 13154 mRNA_4786 0.43 -0.6
1,011,221 + 13154 mRNA_4786 0.44 -1.1
1,011,224 + 13154 mRNA_4786 0.45 -1.0
1,011,228 + 13154 mRNA_4786 0.46 -0.2
1,011,230 - 13154 mRNA_4786 0.46 1.5
1,011,230 + 13154 mRNA_4786 0.46 -0.2
1,011,243 - 13154 mRNA_4786 0.49 -0.6
1,011,244 - 13154 mRNA_4786 0.49 0.8
1,011,245 - 13154 mRNA_4786 0.49 0.9
1,011,246 + 13154 mRNA_4786 0.49 2.9
1,011,263 - 13154 mRNA_4786 0.53 -1.2
1,011,271 + 13154 mRNA_4786 0.54 -0.7
1,011,274 + 13154 mRNA_4786 0.55 -0.1
1,011,276 - 13154 mRNA_4786 0.55 0.7
1,011,286 - 13154 mRNA_4786 0.57 1.1
1,011,287 + 13154 mRNA_4786 0.57 0.8
1,011,288 + 13154 mRNA_4786 0.58 0.5
1,011,290 - 13154 mRNA_4786 0.58 -0.6
1,011,296 - 13154 mRNA_4786 0.59 -0.3
1,011,299 - 13154 mRNA_4786 0.60 -0.9
1,011,304 + 13154 mRNA_4786 0.61 0.5
1,011,313 - 13154 mRNA_4786 0.63 0.1
1,011,322 + 13154 mRNA_4786 0.64 0.0
1,011,326 + 13154 mRNA_4786 0.65 0.6
1,011,327 + 13154 mRNA_4786 0.65 -0.4
1,011,334 - 13154 mRNA_4786 0.67 0.6
1,011,340 - 13154 mRNA_4786 0.68 -0.4
1,011,342 - 13154 mRNA_4786 0.68 -2.9
1,011,342 + 13154 mRNA_4786 0.68 1.6
1,011,345 + 13154 mRNA_4786 0.69 -0.6
1,011,355 + 13154 mRNA_4786 0.71 2.1
1,011,362 - 13154 mRNA_4786 0.72 -1.2
1,011,370 - 13154 mRNA_4786 0.74 0.6
1,011,374 + 13154 mRNA_4786 0.75 1.9
1,011,374 + 13154 mRNA_4786 0.75 -0.5
1,011,381 + 13154 mRNA_4786 0.76 0.5
1,011,384 + 13154 mRNA_4786 0.77 -0.5
1,011,496 - -0.3
1,011,501 - 0.3
1,011,530 - 2.6
1,011,623 + -0.2
1,012,237 + 13155 mRNA_4787 0.21 0.8
1,012,532 - 13155 mRNA_4787 0.31 -0.7
1,012,538 + 13155 mRNA_4787 0.31 0.1
1,012,731 + 13155 mRNA_4787 0.38 0.4
1,013,197 + 13155 mRNA_4787 0.54 -1.3
1,013,424 - 13155 mRNA_4787 0.62 0.8
1,013,598 - 13155 mRNA_4787 0.68 1.5
1,013,896 + 13155 mRNA_4787 0.78 -0.8
1,014,139 - 13155 mRNA_4787 0.86 0.5
1,014,905 + 13156 mRNA_4788 0.13 2.2
1,015,242 + 13156 mRNA_4788 0.39 0.3