Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4741

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4740: 13108 - Hypothetical Protein, at 896087 to 896524 13108 mRNA_4741: 13109 - KOG2208 Vigilin, at 896784 to 901112 13109 mRNA_4742: 13110 - SUPERFAMILY--SSF52047, at 901391 to 902457 13110

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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895,907 + 0.5
896,044 + 0.6
896,046 - 1.3
896,046 - 1.3
896,055 - -0.2
896,176 - 13108 mRNA_4740 0.20 -0.6
896,209 + 13108 mRNA_4740 0.28 0.7
896,302 + 13108 mRNA_4740 0.49 1.2
896,308 + 13108 mRNA_4740 0.50 -0.8
896,314 + 13108 mRNA_4740 0.52 -0.2
896,424 - 13108 mRNA_4740 0.77 0.2
896,447 + 13108 mRNA_4740 0.82 -0.0
896,455 + 13108 mRNA_4740 0.84 0.7
896,456 - 13108 mRNA_4740 0.84 1.2
896,475 + 13108 mRNA_4740 0.89 0.6
896,510 + -0.4
896,579 - 1.2
896,662 - 0.7
896,752 + 1.3
896,770 - -1.1
896,773 + 1.9
896,788 - -0.4
896,907 - 0.9
896,912 + 1.7
897,050 - 0.7
897,052 + 0.2
897,060 - 2.6
897,066 + 1.2
897,072 + -0.6
897,086 + 2.1
897,181 + 0.7
897,207 - 0.6
897,235 + 13109 mRNA_4741 0.10 -1.0
897,339 + 13109 mRNA_4741 0.13 1.2
897,344 - 13109 mRNA_4741 0.13 -0.0
897,393 - 13109 mRNA_4741 0.14 -0.5
897,400 + 13109 mRNA_4741 0.14 0.9
897,493 - 13109 mRNA_4741 0.16 -0.1
897,798 + 13109 mRNA_4741 0.23 0.1
897,886 + 13109 mRNA_4741 0.25 0.4
897,912 + 13109 mRNA_4741 0.26 -1.1
898,193 - 13109 mRNA_4741 0.33 0.1
898,201 + 13109 mRNA_4741 0.33 0.1
898,210 + 13109 mRNA_4741 0.33 1.2
898,229 - 13109 mRNA_4741 0.33 -1.0
898,395 - 13109 mRNA_4741 0.37 -0.1
898,643 + 13109 mRNA_4741 0.43 -0.4
898,647 - 13109 mRNA_4741 0.43 -1.5
898,656 + 13109 mRNA_4741 0.43 -0.6
898,788 + 13109 mRNA_4741 0.46 0.2
898,791 - 13109 mRNA_4741 0.46 0.1
898,795 - 13109 mRNA_4741 0.46 0.6
899,096 + 13109 mRNA_4741 0.53 0.1
899,353 - 13109 mRNA_4741 0.59 -0.4
899,465 + 13109 mRNA_4741 0.62 0.1
899,647 - 13109 mRNA_4741 0.66 -1.0
899,736 - 13109 mRNA_4741 0.68 -0.2
899,784 + 13109 mRNA_4741 0.69 -0.6
899,827 - 13109 mRNA_4741 0.70 -1.7
899,859 + 13109 mRNA_4741 0.71 0.2
899,989 - 13109 mRNA_4741 0.74 -0.1
900,048 - 13109 mRNA_4741 0.75 0.3
900,428 + 13109 mRNA_4741 0.84 0.5
900,595 - 13109 mRNA_4741 0.88 1.6
900,670 + 13109 mRNA_4741 0.90 0.7
900,834 - 0.3
900,885 - 1.0
900,892 + 0.0
900,967 - 0.2
901,042 + 0.7
901,180 + 0.9
901,282 - 1.1
901,357 + -0.3
901,862 - 13110 mRNA_4742 0.44 -1.2
901,928 + 13110 mRNA_4742 0.50 -0.7
901,930 - 13110 mRNA_4742 0.51 1.0