Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4734

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4733: 13101 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 881363 to 882284 13101 mRNA_4734: 13102 - Hypothetical Protein, at 883185 to 884845 13102 mRNA_4735: 13103 - K03654 recQ ATP-dependent DNA helicase RecQ, at 885330 to 888560 13103

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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882,358 - -0.1
882,366 - -0.5
882,384 - -0.1
882,385 + 0.1
882,413 - -0.1
882,645 - -3.6
882,823 - 0.2
882,826 + 0.2
882,829 - 0.2
882,829 + 0.3
882,833 + -0.4
882,833 + -0.3
882,837 - 0.8
882,842 + 1.0
882,843 + 0.7
882,846 + -0.6
882,846 - 1.8
882,848 + 0.5
882,923 - -0.0
882,967 + 0.7
882,987 + -0.7
883,014 + 0.3
883,111 - -0.7
883,121 + -0.2
883,122 + 1.4
883,125 + 1.1
883,125 - 0.1
883,126 - 0.1
883,130 + -0.4
883,292 + 0.5
883,303 + -0.4
883,435 - 13102 mRNA_4734 0.15 0.9
883,568 + 13102 mRNA_4734 0.23 -0.3
883,741 + 13102 mRNA_4734 0.33 0.7
883,768 + 13102 mRNA_4734 0.35 0.7
884,338 - 13102 mRNA_4734 0.69 1.0
884,713 - -0.6
884,958 + 0.8
885,041 - 1.0
885,160 - 0.1
885,162 - 1.3
885,165 + 1.1
885,179 - -0.2
885,445 + 0.6
885,462 - -0.2
885,469 - 1.2
885,489 + -2.4
885,597 - 0.7
885,601 - 1.4
885,606 + -0.5
885,613 + 0.1
885,620 + -0.1
885,627 + 0.5
885,650 + -0.1
885,790 - 13103 mRNA_4735 0.14 2.9
885,812 + 13103 mRNA_4735 0.15 -1.0