Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4691

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4690: 13058 - HMMPfam-Heterokaryon incompatibility protein Het-C-PF07217, at 783339 to 787092 13058 mRNA_4691: 13059 - Hypothetical Protein, at 787368 to 788152 13059 mRNA_4692: 13060 - K00559 E2.1.1.41, SMT1, ERG6 sterol 24-C-methyltransferase, at 788429 to 789828 13060

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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786,530 - 13058 mRNA_4690 0.85 0.1
786,824 + -0.9
786,942 - -0.1
786,963 + 0.5
786,971 - -1.9
786,979 - 1.9
786,983 + -1.1
786,996 - -0.1
786,996 - -0.8
787,129 - -0.3
787,132 + -0.0
787,136 - 0.5
787,137 - 0.1
787,149 - 0.5
787,154 + 0.0
787,160 + 0.3
787,175 - 0.2
787,267 - -0.6
787,274 - 1.4
787,274 - -0.6
787,277 + -0.5
787,279 + -1.4
787,282 - 1.1
787,300 - 0.6
787,300 - -0.5
787,328 + 0.6
787,337 - 0.3
787,463 + 13059 mRNA_4691 0.12 -0.6
787,586 + 13059 mRNA_4691 0.28 -0.5
787,603 + 13059 mRNA_4691 0.30 -0.9
787,606 + 13059 mRNA_4691 0.30 -0.5
788,025 - 13059 mRNA_4691 0.84 0.1
788,142 - 1.2
788,143 + 0.3
788,186 + 0.2
788,188 - 2.5
788,197 - 0.0
788,203 - -1.1
788,203 + -0.8
788,209 - 1.0
788,212 + 0.3
788,212 - -0.6
788,213 - 1.1
788,217 - -0.9
788,222 + -0.1
788,224 + -3.9