Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4659

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4658: 13026 - Hypothetical Protein, at 705825 to 708792 13026 mRNA_4659: 13027 - KOG1134 Uncharacterized conserved protein, at 709545 to 713167 13027 mRNA_4660: 13028 - Interpro Transcription-silencing protein, cryptic loci regulator Clr2, at 713553 to 716343 13028

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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708,664 + 0.3
708,686 + 0.6
708,763 - 0.3
708,859 - -0.9
708,962 + 1.2
708,971 - 0.3
708,971 - -1.4
708,977 + 0.7
708,982 + -0.5
708,984 - 0.2
708,993 - 0.8
708,995 + 0.9
708,995 - 0.2
708,995 - -1.7
708,996 - -1.3
708,998 + -1.4
709,007 + -0.1
709,011 + 0.7
709,022 + -0.1
709,028 + -0.2
709,047 + -0.7
709,055 + -0.1
709,061 - -0.5
709,062 + 2.6
709,077 - -1.7
709,077 - 0.5
709,079 + -0.2
709,082 - 0.4
709,104 - -0.3
709,115 + 0.2
709,117 + -0.1
709,119 - 0.0
709,120 + -0.8
709,125 - -0.8
709,128 + -0.8
709,137 - 1.1
709,146 + 1.2
709,187 - 0.7
709,192 + -0.8
709,207 + -0.3
709,207 - 0.2
709,214 + -0.3
709,219 - 1.2
709,219 + 1.4
709,224 + -0.7
709,226 + 0.3
709,230 + 0.5
709,231 - -0.5
709,254 - 1.3
709,256 - 0.1
709,258 + 0.7
709,259 + 0.6
709,261 - -1.7
709,261 - 1.2
709,267 + 0.5
709,267 - 0.8
709,268 + -0.1
709,268 + 0.1
709,269 + -0.1
709,275 + 0.2
709,278 - 0.2
709,279 - -0.5
709,288 - 0.3
709,289 + 0.8
709,289 + -0.7
709,294 + -0.0
709,295 - -1.0
709,305 + -1.2
709,306 - -0.2
709,307 - 0.5
709,310 - -0.4
709,311 - -0.3
709,312 + 0.2
709,336 + -0.0
709,419 - 1.1
709,452 - 0.4
710,141 - 13027 mRNA_4659 0.16 -0.1
711,453 - 13027 mRNA_4659 0.53 -0.0
712,599 + 13027 mRNA_4659 0.84 0.5
712,884 - 0.3
712,901 - 0.5
712,918 - -0.8
712,932 + -0.5
713,060 + -0.5
713,213 + -0.2
713,215 + -0.5
713,216 - -0.5
713,216 - -0.8
713,223 + -0.7
713,225 - -0.0
713,239 + 0.1
713,244 - 0.2
713,249 - -0.9
713,249 - -1.4
713,301 + 0.5
713,303 + 0.4
713,312 - -0.7
713,326 - 1.8
713,328 - -0.7
713,329 - -1.2
713,331 + 0.0
713,331 + 0.2
713,341 + -1.0
713,348 - 0.8
713,351 + 1.9
713,360 - -1.3
713,367 + -0.6
713,382 - 0.6
713,391 + -0.4
713,487 - 2.4
713,523 - 1.6
713,530 - 0.9
713,695 - -1.2
713,990 - 13028 mRNA_4660 0.16 -1.1
714,137 + 13028 mRNA_4660 0.21 -1.0