Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4654

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4653: 13021 - KOG1203 Predicted dehydrogenase, at 698534 to 699580 13021 mRNA_4654: 13022 - KOG4253 Tryptophan-rich basic nuclear protein, at 699730 to 700546 13022 mRNA_4655: 13023 - K03124 TFIIB, GTF2B, SUA7, tfb transcription initiation factor TFIIB, at 700768 to 702328 13023

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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698,835 + 13021 mRNA_4653 0.29 0.4
698,874 - 13021 mRNA_4653 0.32 0.9
699,016 + 13021 mRNA_4653 0.46 0.6
699,223 + 13021 mRNA_4653 0.66 -0.4
699,283 - 13021 mRNA_4653 0.72 1.0
699,286 - 13021 mRNA_4653 0.72 0.4
699,456 + 13021 mRNA_4653 0.88 0.4
699,557 + 0.8
699,616 - 0.5
699,630 + 0.0
699,666 + 1.2
699,745 - -0.0
700,148 + 13022 mRNA_4654 0.51 -1.7
700,165 - 13022 mRNA_4654 0.53 -1.1
700,419 - 13022 mRNA_4654 0.84 0.8
700,600 - -0.6
700,605 + 0.2