Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4636

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4635: 13003 - Hypothetical Protein, at 659514 to 660743 13003 mRNA_4636: 13004 - BLAST fungal specific transcription protein, putative [Rhiz..., at 660911 to 661323 13004 mRNA_4637: 13005 - Hypothetical Protein, at 661764 to 663098 13005

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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659,958 + 13003 mRNA_4635 0.36 -0.3
659,990 + 13003 mRNA_4635 0.39 0.3
660,247 - 13003 mRNA_4635 0.60 -0.9
660,379 + 13003 mRNA_4635 0.70 0.0
660,390 - 13003 mRNA_4635 0.71 1.2
660,395 + 13003 mRNA_4635 0.72 -2.7
660,553 - 13003 mRNA_4635 0.84 -0.0
660,555 - 13003 mRNA_4635 0.85 0.1
660,706 + -0.7
660,834 + 1.3
660,858 + -1.9
660,860 - -0.2
660,868 + -0.1
661,148 - 13004 mRNA_4636 0.57 0.6
661,164 - 13004 mRNA_4636 0.61 -0.1
661,167 + 13004 mRNA_4636 0.62 0.7
661,170 + 13004 mRNA_4636 0.63 -0.2
661,297 - -0.1
661,713 - -0.1
661,728 - -0.4
661,729 - -1.0
661,999 + 13005 mRNA_4637 0.18 -0.0
662,018 + 13005 mRNA_4637 0.19 1.0
662,021 - 13005 mRNA_4637 0.19 1.3
662,271 - 13005 mRNA_4637 0.38 -0.3
662,272 + 13005 mRNA_4637 0.38 -0.2