Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4626

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4625: 12993 - K09660 MPDU1 mannose-P-dolichol utilization defect 1, at 629352 to 630709 12993 mRNA_4626: 12994 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 630956 to 632424 12994 mRNA_4627: 12995 - K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4, at 632706 to 638769 12995

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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630,253 - 12993 mRNA_4625 0.66 -0.7
630,431 - 12993 mRNA_4625 0.79 0.6
630,825 + 0.6
630,844 - 0.8
630,860 - -1.3
630,866 - -0.1
630,867 + -0.8
630,876 + 1.2
630,885 + -0.4
630,892 - -0.4
630,912 - 2.7
631,104 + 12994 mRNA_4626 0.10 0.1
631,108 + 12994 mRNA_4626 0.10 0.1
631,118 + 12994 mRNA_4626 0.11 -0.0
631,220 - 12994 mRNA_4626 0.18 -0.2
631,224 - 12994 mRNA_4626 0.18 3.0
631,992 + 12994 mRNA_4626 0.71 -1.9
632,513 + 0.6
632,684 - -0.7
632,836 - -1.7
632,996 + -2.6