Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4591

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4590: 12958 - Hypothetical Protein, at 537053 to 538336 12958 mRNA_4591: 12959 - KOG0379 Kelch repeat-containing proteins, at 538604 to 541004 12959 mRNA_4592: 12960 - K11655 BAZ1A, ACF1 bromodomain adjacent to zinc finger domain protein 1A, at 541515 to 545296 12960

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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537,789 - 12958 mRNA_4590 0.57 0.4
537,804 - 12958 mRNA_4590 0.58 -1.1
537,809 + 12958 mRNA_4590 0.59 1.4
537,817 + 12958 mRNA_4590 0.60 -0.0
537,933 - 12958 mRNA_4590 0.69 -0.2
538,220 - 0.7
538,531 + -0.0
538,661 + -1.4
538,666 + 0.5
538,682 - 0.5
538,821 + 0.6
539,127 + 12959 mRNA_4591 0.22 -0.0
539,558 - 12959 mRNA_4591 0.40 -0.1
539,820 - 12959 mRNA_4591 0.51 -0.9
539,848 + 12959 mRNA_4591 0.52 0.1
540,023 + 12959 mRNA_4591 0.59 -0.3
540,135 - 12959 mRNA_4591 0.64 0.5
540,136 - 12959 mRNA_4591 0.64 0.3
540,406 - 12959 mRNA_4591 0.75 0.0
540,593 - 12959 mRNA_4591 0.83 0.2
540,609 + 12959 mRNA_4591 0.84 1.2
540,707 - 12959 mRNA_4591 0.88 1.2
540,881 - -1.3
541,009 - 0.3
541,017 + -0.5
541,029 + -1.6
541,171 - 2.1
541,174 - 2.6
541,175 - 1.2
541,186 - 0.1
541,194 - -0.9
541,198 - 0.9
541,200 + 0.9
541,312 + -2.5
541,317 + -0.9
541,377 + 0.9
541,386 - 0.3
541,394 - -0.9
541,544 + 3.3
541,548 + 1.1