Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4571

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4571: 12939 - KOG4419 5' nucleotidase, at 493411 to 495654 12939 mRNA_4572: 12940 - K06963 TAN1, THUMPD1 tRNA acetyltransferase TAN1, at 495766 to 497109 12940

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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492,426 - 0.2
492,438 - -2.8
492,449 - 0.3
492,459 + 0.6
492,569 + 0.8
492,576 + -1.5
492,581 - 0.9
492,587 - -0.6
492,591 - -1.1
492,598 - 1.9
492,604 - -0.3
492,610 + -0.5
492,611 + -0.1
492,612 + -0.9
492,707 - -2.9
492,717 - 0.5
492,726 + 0.9
492,726 - -0.5
492,726 + -0.1
492,728 + -0.8
492,740 + 0.5
492,748 - -0.4
492,748 + 0.5
492,753 + 1.0
492,754 + -1.3
492,758 - 0.5
492,776 - -0.1
492,777 - 0.1
492,783 - 1.6
492,799 - -0.6
492,799 + 0.6
492,800 - 1.0
492,803 - -1.6
492,831 - -0.6
492,832 - 0.3
492,841 + 0.5
492,849 - -0.1
492,853 + 1.1
492,859 - -0.0
492,863 + 0.3
492,863 + 0.5
492,872 + -1.3
492,873 + 0.5
492,873 - -1.5
492,875 + 0.3
492,884 - 0.7
492,886 - 0.9
492,889 - 0.1
492,898 - 0.1
492,907 + 2.3
492,919 - -0.3
492,919 - 0.3
492,947 - -0.0
492,947 + 0.2
492,949 - 0.9
492,954 + -0.6
492,960 - -0.1
492,994 - 1.5
493,025 + 0.6
493,089 + -0.4
493,166 - -0.1
493,438 + 1.2
493,477 - -1.0
494,171 + 12939 mRNA_4571 0.34 0.4
494,329 - 12939 mRNA_4571 0.41 -0.3
495,365 + 12939 mRNA_4571 0.87 0.3
495,369 - 12939 mRNA_4571 0.87 -0.2