Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4528

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4527: 12895 - SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 384813 to 386229 12895 mRNA_4528: 12896 - Hypothetical Protein, at 386739 to 388320 12896 mRNA_4529: 12897 - HMMPfam-Galactose oxidase, central domain-PF13418,SUPERFAMILY--SSF117281, at 389122 to 390984 12897

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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385,781 + 12895 mRNA_4527 0.68 0.3
385,865 - 12895 mRNA_4527 0.74 1.7
386,685 - 2.0
387,006 + 12896 mRNA_4528 0.17 -0.2
387,226 - 12896 mRNA_4528 0.31 -0.2
387,849 - 12896 mRNA_4528 0.70 1.2
388,079 + 12896 mRNA_4528 0.85 -0.6
388,235 - -0.5
388,420 + -0.1
388,449 + -0.3
388,556 - 0.6
388,561 + 0.1
388,571 + 0.4
388,571 + 0.6
388,574 - 0.0
388,590 - 0.5
388,593 - 0.2
388,732 + -0.2
389,149 + -0.3
389,179 - -1.6
389,181 + -3.0