Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4515

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4514: 12882 - K03241 EIF2B3 translation initiation factor eIF-2B subunit gamma, at 358087 to 360216 12882 mRNA_4515: 12883 - SUPERFAMILY--SSF51735, at 360649 to 361233 12883 mRNA_4516: 12884 - BLAST ketoreductase [Coccidioides immitis RS], at 361313 to 361864 12884

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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360,273 + 1.2
360,433 + 0.5
360,545 - -0.2
360,577 - 1.5
360,604 + 0.7
360,704 + -0.1
360,749 + 12883 mRNA_4515 0.17 -0.3
361,128 + 12883 mRNA_4515 0.82 0.0
361,132 - 12883 mRNA_4515 0.83 -1.0
361,590 + 12884 mRNA_4516 0.50 1.6
361,738 + 12884 mRNA_4516 0.77 -0.1
361,743 - 12884 mRNA_4516 0.78 -1.4
361,746 + 12884 mRNA_4516 0.78 1.5
361,747 + 12884 mRNA_4516 0.79 -0.4
361,754 - 12884 mRNA_4516 0.80 0.0
361,754 - 12884 mRNA_4516 0.80 0.5
361,764 + 12884 mRNA_4516 0.82 0.2
361,886 - -0.1
361,905 - 0.7
361,910 - 0.9
361,919 + -0.3
361,924 + 0.2
362,050 - -0.8
362,069 + 0.2
362,195 - -2.8
362,224 - -1.3
362,226 + -0.2
362,229 - -0.3
362,231 + 1.2