Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4499

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4498: 12866 - Hypothetical Protein, at 322589 to 323741 12866 mRNA_4499: 12867 - K01968 E6.4.1.4A 3-methylcrotonyl-CoA carboxylase alpha subunit, at 323884 to 327513 12867 mRNA_4500: 12868 - K14304 NUP85 nuclear pore complex protein Nup85, at 327724 to 330564 12868

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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323,270 + 12866 mRNA_4498 0.59 0.1
323,316 - 12866 mRNA_4498 0.63 0.0
323,421 + 12866 mRNA_4498 0.72 -0.5
323,656 + 0.6
324,329 - 12867 mRNA_4499 0.12 1.3
324,333 - 12867 mRNA_4499 0.12 -0.2
324,393 - 12867 mRNA_4499 0.14 2.0
324,557 - 12867 mRNA_4499 0.19 -0.3
324,563 + 12867 mRNA_4499 0.19 -1.1
325,142 + 12867 mRNA_4499 0.35 0.5
325,544 + 12867 mRNA_4499 0.46 -2.5
325,589 - 12867 mRNA_4499 0.47 -1.6
325,687 - 12867 mRNA_4499 0.50 -0.7
325,838 + 12867 mRNA_4499 0.54 -0.2
326,560 + 12867 mRNA_4499 0.74 0.6
326,561 - 12867 mRNA_4499 0.74 0.9
327,285 - 2.3
327,422 + 0.1
327,434 - 1.3
327,437 + -0.1
327,447 + 1.3
327,674 + 0.8
327,798 - -0.3
328,363 - 12868 mRNA_4500 0.22 -0.0
328,485 - 12868 mRNA_4500 0.27 0.7