Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4490

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4489: 12857 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 302712 to 304024 12857 mRNA_4490: 12858 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 304461 to 305865 12858 mRNA_4491: 12859 - Hypothetical Protein, at 306091 to 307232 12859

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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303,480 - 12857 mRNA_4489 0.58 -0.1
303,490 - 12857 mRNA_4489 0.59 0.2
303,781 - 12857 mRNA_4489 0.81 1.1
303,796 + 12857 mRNA_4489 0.83 1.1
303,924 - 0.7
303,937 - 0.1
304,081 - 0.2
304,083 + -0.0
304,112 + 0.5
304,112 + 1.8
304,122 + 0.5
304,123 - 0.0
304,174 - 1.1
304,196 - -0.2
304,234 + -0.1
304,271 + 0.6
304,316 - -0.2
304,338 + -0.3
304,668 - 12858 mRNA_4490 0.15 1.5
304,947 + 12858 mRNA_4490 0.35 -0.7
305,112 + 12858 mRNA_4490 0.46 -0.3
305,263 - 12858 mRNA_4490 0.57 -0.1
305,325 - 12858 mRNA_4490 0.61 -1.9
305,721 + 12858 mRNA_4490 0.90 0.1
305,904 - -0.0
306,298 + 12859 mRNA_4491 0.18 1.7
306,548 - 12859 mRNA_4491 0.40 0.4
306,586 + 12859 mRNA_4491 0.43 -0.2
306,765 + 12859 mRNA_4491 0.59 0.9
306,812 + 12859 mRNA_4491 0.63 0.7