Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4459

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4458: 12826 - K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein), at 233111 to 233901 12826 mRNA_4459: 12827 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 234229 to 236969 12827 mRNA_4460: 12828 - SUPERFAMILY--SSF52047, at 237623 to 238720 12828

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
233,981 + -2.1
234,123 - 1.1
234,425 + 0.2
234,439 + 0.4
234,460 - -0.4
234,842 + 12827 mRNA_4459 0.22 0.0
234,898 - 12827 mRNA_4459 0.24 -0.3
235,600 + 12827 mRNA_4459 0.50 1.2
236,084 + 12827 mRNA_4459 0.68 4.1
236,205 + 12827 mRNA_4459 0.72 -1.3
236,248 - 12827 mRNA_4459 0.74 1.0
236,285 - 12827 mRNA_4459 0.75 0.2
236,343 - 12827 mRNA_4459 0.77 1.0
236,488 - 12827 mRNA_4459 0.82 1.0
236,509 + 12827 mRNA_4459 0.83 -1.5
236,529 + 12827 mRNA_4459 0.84 -0.2
236,530 - 12827 mRNA_4459 0.84 1.8
236,644 - 12827 mRNA_4459 0.88 0.4
236,646 + 12827 mRNA_4459 0.88 -0.5
236,679 - 12827 mRNA_4459 0.89 1.1
236,682 - 12827 mRNA_4459 0.89 0.7
236,762 + 0.4
236,797 + 2.6
236,799 + 0.1
236,892 - -1.2
236,929 + 0.6
236,933 - 0.2
236,939 - 0.7
236,971 - 0.8
237,027 - 0.4
237,040 + 0.9
237,114 + -0.2
237,236 - -0.1
237,353 - 0.2
237,394 - -0.2
237,406 + 0.5
237,426 + 1.0
237,562 + -0.6
237,582 + 1.0
237,585 - 0.2
237,629 + -0.7
237,800 + 12828 mRNA_4460 0.16 1.3