Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4383

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4382: 12750 - Hypothetical Protein, at 61848 to 63283 12750 mRNA_4383: 12751 - Hypothetical Protein, at 63561 to 65177 12751 mRNA_4384: 12752 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 65499 to 68176 12752

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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62,785 - 12750 mRNA_4382 0.65 -0.1
62,792 + 12750 mRNA_4382 0.66 1.0
63,062 + 12750 mRNA_4382 0.85 0.5
63,066 - 12750 mRNA_4382 0.85 0.9
63,067 + 12750 mRNA_4382 0.85 0.2
63,071 - 12750 mRNA_4382 0.85 0.3
63,130 - 12750 mRNA_4382 0.89 0.3
63,207 - 0.6
63,354 + 1.1
63,394 - 0.5
63,394 - 2.1
63,498 - 0.9
63,510 - 1.7
63,516 + 0.1
63,516 + -0.9
63,531 + -1.1
63,953 + 12751 mRNA_4383 0.24 -0.1
64,638 - 12751 mRNA_4383 0.67 -0.5
64,656 - 12751 mRNA_4383 0.68 2.6
64,809 - 12751 mRNA_4383 0.77 0.2
64,829 + 12751 mRNA_4383 0.78 -0.2
64,830 - 12751 mRNA_4383 0.78 1.7
64,974 - 12751 mRNA_4383 0.87 0.9
65,093 + 0.0
65,101 - -1.1
65,128 - 2.1
65,136 + 1.9
65,266 + 0.1
65,323 - -0.8
65,390 - -0.4
65,392 + 0.6
65,434 + 1.3
65,439 + 1.6
65,441 + -1.0
65,443 - -0.3
65,728 - 0.9
65,875 - 12752 mRNA_4384 0.14 -0.3
65,951 + 12752 mRNA_4384 0.17 1.1
65,960 + 12752 mRNA_4384 0.17 -0.9
66,171 - 12752 mRNA_4384 0.25 -0.6