Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4369

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4369: 12737 - K03671 trxA thioredoxin 1, at 29253 to 29815 12737 mRNA_4370: 12738 - HMMPfam-Purine nucleoside permease (NUP)-PF06516,PIRSF--PIRSF013171, at 30221 to 32027 12738

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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28,357 - 2.6
28,362 + -0.7
28,481 + -0.1
28,533 + -1.0
28,680 + 0.6
28,784 - 0.4
28,862 - 0.3
28,867 + -1.2
28,867 + -0.1
28,870 - -1.4
28,878 - 1.2
29,035 - 0.7
29,094 + 2.2
29,103 + 1.5
29,218 - -0.8
29,668 - 12737 mRNA_4369 0.74 0.7
29,839 + 0.7
30,499 - 12738 mRNA_4370 0.15 -0.6
30,508 - 12738 mRNA_4370 0.16 -1.0