Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4240

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4239: 12607 - Hypothetical Protein, at 1691409 to 1692539 12607 mRNA_4240: 12608 - KOG1700 Regulatory protein MLP and related LIM proteins, at 1692949 to 1695625 12608 mRNA_4241: 12609 - Hypothetical Protein, at 1696201 to 1696797 12609

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
1,692,026 - 12607 mRNA_4239 0.55 2.3
1,692,027 + 12607 mRNA_4239 0.55 -0.2
1,692,031 - 12607 mRNA_4239 0.55 -0.5
1,692,108 + 12607 mRNA_4239 0.62 -1.9
1,692,124 - 12607 mRNA_4239 0.63 0.0
1,692,126 + 12607 mRNA_4239 0.63 -0.8
1,692,189 - 12607 mRNA_4239 0.69 -0.5
1,692,242 - 12607 mRNA_4239 0.74 1.6
1,692,331 + 12607 mRNA_4239 0.82 -0.2
1,692,480 - 2.4
1,692,568 + -2.0
1,692,579 - 1.0
1,692,612 - 0.5
1,692,737 + 0.1
1,692,878 + 0.1
1,693,023 - -0.9
1,693,029 - -0.2
1,693,045 - -0.4
1,693,054 + 0.8
1,693,077 - -2.1
1,693,614 + 12608 mRNA_4240 0.25 -0.2
1,693,931 - 12608 mRNA_4240 0.37 0.2
1,694,378 + 12608 mRNA_4240 0.53 1.7
1,694,514 - 12608 mRNA_4240 0.58 -0.4
1,694,518 + 12608 mRNA_4240 0.59 -1.0
1,694,538 + 12608 mRNA_4240 0.59 -0.5
1,694,957 + 12608 mRNA_4240 0.75 -0.4
1,695,065 - 12608 mRNA_4240 0.79 -0.4
1,695,122 + 12608 mRNA_4240 0.81 -0.4
1,695,266 + 12608 mRNA_4240 0.87 1.0
1,695,271 + 12608 mRNA_4240 0.87 -0.2
1,695,312 + 12608 mRNA_4240 0.88 -0.3
1,695,491 + -1.2
1,695,496 - -0.2
1,695,532 + -0.4
1,695,535 - 0.3
1,695,684 + -0.1
1,695,803 + -0.8
1,695,849 - -1.1
1,695,982 - 1.4
1,696,074 + -0.3
1,696,113 - -0.2
1,696,392 - 12609 mRNA_4241 0.32 -0.2
1,696,408 - 12609 mRNA_4241 0.35 -1.0
1,696,408 + 12609 mRNA_4241 0.35 2.4
1,696,429 + 12609 mRNA_4241 0.38 0.1
1,696,526 + 12609 mRNA_4241 0.54 0.2
1,696,547 + 12609 mRNA_4241 0.58 -1.4
1,696,558 - 12609 mRNA_4241 0.60 0.3
1,696,598 + 12609 mRNA_4241 0.66 -0.2