Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4143

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4142: 12510 - Hypothetical Protein, at 1454343 to 1455986 12510 mRNA_4143: 12511 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,HMMPfam-Acetyltransferase (GNAT) domain-PF13444,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 1456221 to 1457720 12511 mRNA_4144: 12512 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 1457920 to 1460424 12512

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,455,388 - 12510 mRNA_4142 0.64 -0.5
1,455,810 - 12510 mRNA_4142 0.89 1.4
1,455,954 + -0.2
1,456,067 - -0.5
1,456,085 - 0.9
1,456,089 - -0.7
1,456,100 + -0.0
1,456,117 - -1.3
1,456,261 - 2.1
1,456,262 + -0.6
1,456,679 - 12511 mRNA_4143 0.31 -0.2
1,456,688 + 12511 mRNA_4143 0.31 -0.6
1,456,712 + 12511 mRNA_4143 0.33 0.3
1,456,989 + 12511 mRNA_4143 0.51 0.1
1,457,478 - 12511 mRNA_4143 0.84 -1.2
1,457,554 - 12511 mRNA_4143 0.89 0.2
1,457,841 + -0.2
1,458,158 - 0.5
1,458,358 - 12512 mRNA_4144 0.17 -0.2
1,458,613 + 12512 mRNA_4144 0.28 -0.8