Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4097

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4096: 12464 - BLAST bestrophin domain protein [Rhizoctonia solani AG-3 Rh..., at 1349732 to 1355090 12464 mRNA_4097: 12465 - KOG1339 Aspartyl protease, at 1355805 to 1357462 12465 mRNA_4098: 12466 - K19950 SEC9 protein transport protein SEC9, at 1357850 to 1359153 12466

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
1,354,868 + 0.4
1,354,975 - 0.9
1,354,985 - 1.7
1,355,012 + 0.1
1,355,012 - -1.5
1,355,016 + 0.1
1,355,160 + -0.2
1,355,171 - -0.2
1,355,174 - 0.7
1,355,276 - 1.0
1,355,314 - -0.0
1,355,321 - 0.6
1,355,321 + 1.2
1,355,323 + -1.5
1,355,332 - -1.1
1,355,340 + 0.0
1,355,342 + 0.2
1,355,360 - -0.5
1,355,405 - 0.8
1,355,438 - -2.4
1,355,446 + -1.9
1,355,489 + 2.8
1,355,570 + 0.0
1,355,577 + 0.2
1,355,579 - -1.0
1,355,586 + 0.1
1,355,591 - -1.1
1,355,592 - -0.2
1,355,604 - 0.2
1,355,656 - 0.3
1,355,659 - -0.6
1,355,659 - -0.5
1,355,671 - -0.1
1,355,671 - 0.3
1,355,671 - -0.6
1,355,673 - 0.4
1,355,675 - 0.8
1,355,675 + -1.4
1,355,675 + -0.2
1,355,675 + -0.4
1,355,676 - 1.4
1,355,680 - -0.8
1,355,680 + -0.4
1,355,682 + 0.8
1,355,683 + -0.3
1,355,686 - 1.0
1,355,687 - 0.8
1,355,690 + -0.9
1,355,690 + 0.8
1,355,697 - 1.2
1,355,698 - 0.8
1,355,698 + 0.9
1,355,699 + 0.3
1,355,705 + 0.2
1,355,706 + -0.9
1,355,710 + -1.1
1,355,712 - -1.5
1,355,716 + 0.1
1,355,721 + -0.3
1,355,841 + -0.3
1,355,852 + -2.8
1,355,856 - -0.6
1,355,863 - -0.7
1,355,873 + -2.4
1,355,990 + 12465 mRNA_4097 0.11 -1.6
1,356,131 - 12465 mRNA_4097 0.20 -0.6
1,356,145 + 12465 mRNA_4097 0.21 -1.8
1,356,281 - 12465 mRNA_4097 0.29 -1.4
1,356,309 - 12465 mRNA_4097 0.30 0.9
1,356,314 - 12465 mRNA_4097 0.31 -1.6
1,357,025 + 12465 mRNA_4097 0.74 -3.2
1,357,176 - 12465 mRNA_4097 0.83 -1.3
1,357,314 + -0.7
1,357,462 + -1.5
1,357,583 + -0.4
1,357,601 - -0.3
1,357,605 - -1.5
1,357,607 + 1.5
1,357,612 - -0.1
1,357,614 + 0.1
1,357,625 - 0.1
1,357,731 + -0.1
1,357,733 - 0.5
1,357,738 + -1.0
1,357,740 + -0.5
1,357,753 + 1.5
1,357,765 - 2.1
1,357,768 - -1.0
1,357,777 - 1.1
1,357,784 - 2.5
1,357,787 - 0.4
1,357,789 - -0.0
1,357,807 - 0.1