Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4094

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4093: 12461 - Hypothetical Protein, at 1338946 to 1342318 12461 mRNA_4094: 12462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1343294 to 1345409 12462

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,342,361 - 0.6
1,342,368 - 0.3
1,342,374 - -0.9
1,342,375 - 0.1
1,342,381 - 0.2
1,342,381 - 0.9
1,342,383 - 0.5
1,342,384 - -0.3
1,342,385 + -1.0
1,342,389 + -0.4
1,342,390 + -0.6
1,342,403 - -0.5
1,342,403 + -1.8
1,342,409 + -0.8
1,342,409 - -0.3
1,342,411 + 0.7
1,342,412 - 0.1
1,342,413 - 1.3
1,342,417 - 1.7
1,342,418 + 0.0
1,342,418 + -1.5
1,342,422 - 0.4
1,342,424 - 0.1
1,342,424 + -1.5
1,342,431 + 0.9
1,342,441 + 0.3
1,342,442 - 0.6
1,342,444 - 2.3
1,342,454 - 0.5
1,342,459 + -0.2
1,342,461 - 0.4
1,342,474 + -0.2
1,342,586 + 1.2
1,342,592 - 0.2
1,342,593 + 0.8
1,342,596 + 0.0
1,342,623 - 0.4
1,342,628 - 0.9
1,342,653 + -0.1
1,342,656 - 0.8
1,342,658 + -0.0
1,342,789 - 1.1
1,342,803 + 0.5
1,342,817 - -0.2
1,342,933 - 1.1
1,342,947 - 2.2
1,342,953 - 2.8
1,342,964 - 0.3
1,342,972 - 0.8
1,342,976 - 1.1
1,342,976 - 1.0
1,342,977 + 1.5
1,342,983 - 0.1
1,342,989 + -0.7
1,343,001 + 1.3
1,343,008 - -0.9
1,343,013 - 0.5
1,343,015 + -0.6
1,343,016 + 2.4
1,343,026 + -1.0
1,343,026 - 0.2
1,343,031 + -0.1
1,343,046 + 0.1
1,343,168 + 0.2
1,343,281 - -0.1
1,343,291 + 0.1
1,343,298 + -1.3
1,343,422 - -0.9
1,344,459 - 12462 mRNA_4094 0.55 -0.3
1,344,468 + 12462 mRNA_4094 0.55 -1.6
1,344,583 - 12462 mRNA_4094 0.61 -0.0
1,344,611 + 12462 mRNA_4094 0.62 0.9
1,344,749 - 12462 mRNA_4094 0.69 -0.6
1,345,605 + 0.2
1,345,753 - 0.2
1,345,920 - -1.5
1,346,032 + -0.2
1,346,045 - -0.2
1,346,206 - -0.4
1,346,210 + 0.8
1,346,213 - -0.7
1,346,229 - 0.2
1,346,232 - -0.2
1,346,240 - 1.6
1,346,341 - 0.3
1,346,405 + -0.8