Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4076

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4075: 12443 - Hypothetical Protein, at 1297147 to 1298186 12443 mRNA_4076: 12444 - K12486 SMAP stromal membrane-associated protein, at 1298752 to 1301700 12444 mRNA_4077: 12445 - K07101 K07101 uncharacterized protein, at 1302423 to 1303629 12445

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,297,937 + 12443 mRNA_4075 0.76 0.1
1,298,068 - 12443 mRNA_4075 0.89 1.4
1,298,210 - 0.5
1,298,242 - -2.3
1,298,263 - -0.2
1,298,792 + 0.3
1,298,816 - 0.1
1,298,843 + 1.7
1,298,996 - 0.8
1,299,073 + 12444 mRNA_4076 0.11 1.7
1,299,086 + 12444 mRNA_4076 0.11 1.0
1,299,088 - 12444 mRNA_4076 0.11 2.7
1,299,160 + 12444 mRNA_4076 0.14 -0.0
1,299,366 + 12444 mRNA_4076 0.21 0.6
1,299,396 + 12444 mRNA_4076 0.22 0.6
1,299,405 - 12444 mRNA_4076 0.22 0.1
1,299,415 + 12444 mRNA_4076 0.22 -1.5
1,299,461 + 12444 mRNA_4076 0.24 1.9
1,299,673 + 12444 mRNA_4076 0.31 -0.1
1,300,106 + 12444 mRNA_4076 0.46 0.1
1,300,294 + 12444 mRNA_4076 0.52 -0.4
1,300,739 + 12444 mRNA_4076 0.67 0.9
1,301,029 + 12444 mRNA_4076 0.77 0.9
1,301,323 - 12444 mRNA_4076 0.87 0.3
1,301,339 - 12444 mRNA_4076 0.88 3.0
1,301,454 - -0.4
1,301,461 + 0.2
1,301,601 - 1.2
1,301,757 - 0.2
1,301,765 + -0.3
1,301,770 - 0.5
1,301,772 - 0.8
1,301,773 + 0.5
1,301,903 + -0.0
1,301,903 + 0.5
1,301,909 + -1.2
1,302,042 + -0.0
1,302,209 - 0.1
1,302,614 - 12445 mRNA_4077 0.16 0.6
1,302,620 - 12445 mRNA_4077 0.16 -0.1
1,302,621 - 12445 mRNA_4077 0.16 0.8
1,302,633 + 12445 mRNA_4077 0.17 -1.2