Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4073

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4073: 12441 - KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily, at 1289384 to 1292413 12441 mRNA_4074: 12442 - KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily, at 1292721 to 1296857 12442

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,288,773 - -0.8
1,289,010 + -0.2
1,289,011 - -0.1
1,290,347 - 12441 mRNA_4073 0.32 -1.5
1,290,735 + 12441 mRNA_4073 0.45 -0.3
1,291,029 + 12441 mRNA_4073 0.54 -0.0
1,291,151 + 12441 mRNA_4073 0.58 0.3
1,291,405 - 12441 mRNA_4073 0.67 0.0
1,291,409 - 12441 mRNA_4073 0.67 0.1
1,291,409 - 12441 mRNA_4073 0.67 -1.7
1,292,026 + 12441 mRNA_4073 0.87 1.2
1,292,174 - -0.9
1,292,178 - -0.3
1,292,289 + -1.2
1,292,346 + 0.9
1,292,587 - 1.8
1,292,605 - 0.9
1,292,606 - -3.9
1,292,610 - 0.5
1,292,610 + -3.0
1,292,614 + -0.4
1,292,621 + -0.0
1,292,734 - 0.8
1,292,776 + -1.0
1,292,878 + -0.4
1,292,879 - 0.0
1,293,024 - -0.2
1,293,027 + 0.3